Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0523 ATGATGGAGCAGATTTTGCTTCATGGGACGCTTCATGGGACCATCTATGAAGTTGACAGGCTTTCCAGCGGAGGTCCCTGGAATTTCATCGACAAGCTGAAGAGACGCATTGAGAGGGCCGGTAGTTCCAAGGTATATGTAACAATCGATTTAGACAAGGCTAGAGTTGGTCGAACCAGGAAGTTAGAAAACGAGGAGACAAATCCCCATTGGAGCGAATGTTTCCATATCTACTGTGCCCACAAGGCTTCTCATGTTGTATTCTCTGTCAAACAAGAAAATCCTATTGGAGCAACTGTCATTGGAAGAGCTCAATTACCAGTCGAGGAACTCCTGGAAGGAGAAGTGGATAGATGGCTTGAGCTCTTCCATCATGATCGCACTCCCATACATGGAGGCTCTAAATTACATGTCAAACTACAATTTTTTGATGTTACTCGAGAATGTAACTGGTCTCGAGGCATTACAAGCCCAAAATTTCCAGGAGTTCCTTACACATTCTTCCCTCAGAGAAAAGGCTGCAGAGTTTTACTTTACCAAGATGCCCATATCCCAAACAAATTCATCCCAAAAATCCCCCTTTCTGGGGGCAAGTATTATGAGCCGCACCGCTGCTGGGAAGATATTTTTCATGCCATTTCCAATGCTAAACAGTTGATTTACATAACAGGCTGGTCGGTGTATACTAAAATCACCTTGGTAAGGTACTCAAGGGGGCAAAAGCCAGGGGAACACGCGACCCTGGGAGAGCTTTTTAATAAGAAGACCTCAACCCTGGGAGAGCTTCTGAAGAAGAAGGCCAGTGAAGGTGTGAGGGTTCTAATGCTTGTTTGGGATGACAGAACTTCTGTTAAGTTACTAAAGAAGGATGGGTTGATGGCCACCCATGATGAAGACACCGGGAAGTATTTCCATGGCAGTGAAGTCCACTGTGTCTTATGCCCCCGTGATCCCGATAATGGACTTAGCATTGTTCAGGACATAGAGATATCTACCATGTTCACTCATCACCAGAAGATTGTGGTAGTGGACAGTGAGATGCCTAATCGAGGATCAGAACGTCGGAGAATTGTGAGTTTCATTGGTGGCATTGATCTCTGTGATGGGAGGTATGATACTCCCACACATACCATTTTCAGGACTCTAGACACAGTGAACCACGATGATTTTCGTCAGCCTAATTTTCCGAATGCCTCCATTACTAAAGGTGGACCAAGACAGCCCTGGCATGATGTCCATTGTCGGTTAGAAGGAGCAATTGCATGGGATGTCTTGTTCAATTTCGAGCAAAGGTGGAGAAAACAAGGTGGGAAGGATCTGCTTGTTCAACTAAGAGAACTTGATGACATAATTATACCTCCATCTCCAGTCATGTTCCCTGAAGACCATGAAACATGGAATGTTCAACTGTTCCGATCCATTGATGGTGGGGCTGCTTTCGGCTTTCCTGATTCTCCTGAGGATGCTGCGAGAGCAGGGCTTATCTGTGGGAGTGACCATATCATTGACCGGAGCATTCAGGATGCTTATATCCATGCCATCCGAAAAGCCAAAAATTTCATTTACATTGAAAACCAGTATTTTCTTGGAAGCTCTTTCTGCTGGAACTCGGATGGCCTCAAAGTAGAGGACATTGGTGCTTCGCATCTCATACCAAAGGAACTGTCACTAAAGGTCGTCAGTAAGATCGAAACAGGAGAGAGATTTTCCATATATGTTGTAGTTCCAATGTGGCCAGAAGGTATCCCAGAGAGTTCATCTGCTCAGGCAATACTGAATTGGCAGAAGAGAACAATGGAGATGATGTATAATGATATAGCTCAGGCCCTCCACGCCAAGGGGCTCAAGGCAAACCCCAAGGACTATTTGACATTCTTTTGCCTTGGCAATCGGGAGAGTAAGACAATTGGAGAATATGAACCTCCAGAGAGTCCAGACCATGATACAGATTATTACAGAGCTCAGCAATCCAGGCGGTTCATGATCTATGTCCATGCAAAGATGATGATTGTTGATGATGAATACATAGTCATAGGATCCGCCAACATAAATCAGAGGTCAATGGATGGTGCCAGGGATTCAGAGATTGCAATGGGAGGCTACCAACCGTATCACCTCGCTACCAAGCAGCCTGCCAGGGGTCAAATTCATGGCTTCCGAATGGCATTATGGTATGAACACCTTGGCCTGGTTGATAACTCCTTCCTCCAACCAGAGAGCCTCGACTGTATCCAGAAGGTGAACAAGATTGCTGAAAGGAATTGGAACCTCTATTCCTCAGAGAGAACGGATGATGACTTGCCAGGCCACCTGCTTAGTTACCCCATTTGCGTTACGGATACTGGAGAGGTCAAAGAAGTACCTGGATCAGAGTTCTTTCCCGACACTAAGGCTCAAGTTCTGGGGTCCAAATCTGATTATCTCCCTCCAATCCTCACTACTTGA 2445 0.4556 MMEQILLHGTLHGTIYEVDRLSSGGPWNFIDKLKRRIERAGSSKVYVTIDLDKARVGRTRKLENEETNPHWSECFHIYCAHKASHVVFSVKQENPIGATVIGRAQLPVEELLEGEVDRWLELFHHDRTPIHGGSKLHVKLQFFDVTRECNWSRGITSPKFPGVPYTFFPQRKGCRVLLYQDAHIPNKFIPKIPLSGGKYYEPHRCWEDIFHAISNAKQLIYITGWSVYTKITLVRYSRGQKPGEHATLGELFNKKTSTLGELLKKKASEGVRVLMLVWDDRTSVKLLKKDGLMATHDEDTGKYFHGSEVHCVLCPRDPDNGLSIVQDIEISTMFTHHQKIVVVDSEMPNRGSERRRIVSFIGGIDLCDGRYDTPTHTIFRTLDTVNHDDFRQPNFPNASITKGGPRQPWHDVHCRLEGAIAWDVLFNFEQRWRKQGGKDLLVQLRELDDIIIPPSPVMFPEDHETWNVQLFRSIDGGAAFGFPDSPEDAARAGLICGSDHIIDRSIQDAYIHAIRKAKNFIYIENQYFLGSSFCWNSDGLKVEDIGASHLIPKELSLKVVSKIETGERFSIYVVVPMWPEGIPESSSAQAILNWQKRTMEMMYNDIAQALHAKGLKANPKDYLTFFCLGNRESKTIGEYEPPESPDHDTDYYRAQQSRRFMIYVHAKMMIVDDEYIVIGSANINQRSMDGARDSEIAMGGYQPYHLATKQPARGQIHGFRMALWYEHLGLVDNSFLQPESLDCIQKVNKIAERNWNLYSSERTDDDLPGHLLSYPICVTDTGEVKEVPGSEFFPDTKAQVLGSKSDYLPPILTT* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0523 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 332 370 IPR001736 GO:0003824
Vvi11g0523 814 FunFam Phospholipase D 473 706 - -
Vvi11g0523 814 Gene3D Endonuclease Chain A 492 703 - -
Vvi11g0523 814 SMART pld_4 332 370 IPR001736 GO:0003824
Vvi11g0523 814 SMART pld_4 660 687 IPR001736 GO:0003824
Vvi11g0523 814 Pfam Phospholipase D C terminal 732 804 IPR024632 -
Vvi11g0523 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 660 687 IPR001736 GO:0003824
Vvi11g0523 814 Gene3D C2 domain 5 143 IPR035892 -
Vvi11g0523 814 PANTHER PHOSPHOLIPASE D 5 803 IPR015679 -
Vvi11g0523 814 SUPERFAMILY Phospholipase D/nuclease 146 450 - -
Vvi11g0523 814 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Vvi11g0523 814 FunFam Phospholipase D delta 196 450 - -
Vvi11g0523 814 Pfam C2 domain 37 119 IPR000008 -
Vvi11g0523 814 Gene3D Endonuclease Chain A 195 447 - -
Vvi11g0523 814 PIRSF PLD_plant 1 814 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vvi11g0523 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 144 IPR035892 -
Vvi11g0523 814 SMART C2_3c 10 120 IPR000008 -
Vvi11g0523 814 Pfam Phospholipase D Active site motif 332 370 IPR001736 GO:0003824
Vvi11g0523 814 Pfam Phospholipase D Active site motif 661 687 IPR001736 GO:0003824
Vvi11g0523 814 CDD C2_plant_PLD 5 143 - -
Vvi11g0523 814 SUPERFAMILY Phospholipase D/nuclease 506 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0523 Vvi-Chr11 4701207 4707836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0523 2 814 Phospholipase D Gene Family (Wang group) AT3G15730 71.376 0.0 1241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0523 K01115 - vvi:100259366 1693.71