Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0522 ATGATGGAGCAGAGTTTGGTGCACGGGACGCTTCATGCAACCATCTATGAGGTTGATGGGCTTTCCACCGGAGGTCCCTGGAATTTCATTCAGAAGGTATACACCACCCTAAGCAAACGCATCGTGGGGGCGCCTATTTCCAAGATATATGTGACAATTGATTTGGAAAAAGCTGGAGTTGGTCGAACCAGCAAGTTAGACAATGAAGACTCAAATCCCCGATGGTACCAAAGTTTCCACATTTACTGTGCCCACAAGGCTTCTCATGTTGTATTCTCTGTCAAACAAGATAATCCTATTGGGGCAACTGTTATTGGACGAGCTCACTTACCAGTTGGGGAACTCCTGGAAGGAGAAGTGGATAGATGGCTTGAGCTCTTCCATCATGATCACACTCCCATCAATGGAGGTTCTAAGTTACATGTCAAACTACAATTTGTTGATGTTACTCGAGAATTTAACTGGTCTCGAGGGATTAGGAGCCCAAAATTTCCAGGAGTTCCTTACACATTCTTTCCTCAGAGAAAAGGCTGCAGAGTTTTACTTTACCAAGATGCTCATGTCCCAAATAAATTCATCCCAAAAATTCCCCTTTCTGGGGGCAAGTGTTATGAGCCGCACCAGTGCTGGGAAGATATCTTTCATGCCATTTCTAATGCAAAACACTTAGTTTACATAACAGGCTGGTCTCTGTATACTAAAACTACCTTGGTAAGGTACTCAAGGGGACAAAAGCCAGGGGAACACGCGACCTTGGGAGAGCTTTTTAGGAAGAAGACCTTAACCCTGGGAGAGCTTCTGAAGAAGAAGGCCAGTGAAGGTGTAACGGTCCTAATGCTTCTTTGGGAGGACAGGACTTCTGTTAAGTTACTAAAGAAGGACGGGTTGATGGCCACCCATGGTGAAGACACCGGGAAATATTTCCATGGCACTGGAGTCCATTGTGTCTTATGCCCCCGCAATCCTGACAATGGACTTAGCATTGTTCAGGACATAGAGATATCTGCCATGTTCACTCATCATCAGAAGATTGTGGTGGTGGACAGTGAGATGCCTAATGGAGGATCAGAACATAGGAGAATTGTGAGTTTCATTGGTGGCTTTGATCTTTGTGATGGGAGGTATGATACTCCCACGCATTCCATTTTCAGGACTCTAGACACAGTTCACCATAATGATTTTCGTCAGGCCAATTTTCCCAATGCCTCAATTAGTAAAGGTGGACCAAGAGAGCCCTGGCATGATATTCACTGTCGGTTAGAAGGAGCAATTGCATGGGATGTCTTGTTCAATTTCGAGCAGAGGTGGAGGAAACAAGGTGGGAAGGATCTGCTTGTTCAACTGAGAGAACTTGATGACATAATCATACCTCCATCTCCAGTCATGTTCCCCGAAGACCATGAAACATGGAATGTTCAATTGTTCCGATCCATTGATGGTGGGGCTGCCTTTGGCTTTCCTGATTCTCCTGAGGATGCTGCGAGGGCAGGGCTTATCTGTGGGAATGACCATATCATTGACCGGAGCATTCAGGATGCTTACATCAATGCCATCCGACGAGCAAAAAATTTCATCTACATTGAAAACCAGTATTTTCTTGGAAGTTCCTTCGGCTGGAACTTGGATGGCCTCAAAGTAGAGGACATTGGCGCTTTGCATCTCATACCAAAGGAGCTGTCGCTAAAGATTGTCAGTAAGATTGAAGCAGGGGAGAGGTTTTCCGTATATGTTGTGATTCCAATGTGGCCAGAGGGTGTCCCAGAGAGTTCATGTGCTCAGGTAATACTGAATTGGCAGAAGAGAACTATGGAGATGATGTATAATGATATAGCTCAGGCCCTCCATTCCAAGGGGCTTCAGGCAAACCCCAAGGACTATTTAGCATTCTTTTGCCTTGGGAACCGAGAGAAGAAGAGACACGGAGAATATGAACCTCCAGAGAGTCCAGACCATGACACAAATTATCACAGAGCTCAACAATCCAGGCGGTTCATGATCTATGTCCACGCTAAGATGATGATCGTTGACGATGAATACATAATCACAGGATCCGCCAACATAAATCAGAGGTCAATGGATGGTGCCAGGGATTCAGAGATTGCAATGGGAGCCTACCAACCATATCACCTAGCTTCCAAGCAGCCTGCCAGGGGTCATATTCATGGCTTCCGAATGGCATTATGGTACGAGCACCTTGGCCTGCTTGACAACTCCTTCCTCCAACCAGAGAGCCTGGACTGTATCCAAAAGGTGAACCAGATGGCTGAGAGGAATTGGAACCTCTATACCTCTGAGAGAATGGATCATGACCTGCCAGGACACCTGCTTAGCTACCCCATTTGTGTTACGGATAGTGGAGAGGTGACAGAATTGCCTGGATCAGAGTTCTTCCCTGACACCAAGGCTCCAGTTCTGGGGTCCAAATCTGAGTACATTCCTCCAATGCTCACTACTTGA 2457 0.4615 MMEQSLVHGTLHATIYEVDGLSTGGPWNFIQKVYTTLSKRIVGAPISKIYVTIDLEKAGVGRTSKLDNEDSNPRWYQSFHIYCAHKASHVVFSVKQDNPIGATVIGRAHLPVGELLEGEVDRWLELFHHDHTPINGGSKLHVKLQFVDVTREFNWSRGIRSPKFPGVPYTFFPQRKGCRVLLYQDAHVPNKFIPKIPLSGGKCYEPHQCWEDIFHAISNAKHLVYITGWSLYTKTTLVRYSRGQKPGEHATLGELFRKKTLTLGELLKKKASEGVTVLMLLWEDRTSVKLLKKDGLMATHGEDTGKYFHGTGVHCVLCPRNPDNGLSIVQDIEISAMFTHHQKIVVVDSEMPNGGSEHRRIVSFIGGFDLCDGRYDTPTHSIFRTLDTVHHNDFRQANFPNASISKGGPREPWHDIHCRLEGAIAWDVLFNFEQRWRKQGGKDLLVQLRELDDIIIPPSPVMFPEDHETWNVQLFRSIDGGAAFGFPDSPEDAARAGLICGNDHIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFGWNLDGLKVEDIGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGVPESSCAQVILNWQKRTMEMMYNDIAQALHSKGLQANPKDYLAFFCLGNREKKRHGEYEPPESPDHDTNYHRAQQSRRFMIYVHAKMMIVDDEYIITGSANINQRSMDGARDSEIAMGAYQPYHLASKQPARGHIHGFRMALWYEHLGLLDNSFLQPESLDCIQKVNQMAERNWNLYTSERMDHDLPGHLLSYPICVTDSGEVTELPGSEFFPDTKAPVLGSKSEYIPPMLTT* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0522 818 PIRSF PLD_plant 1 818 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vvi11g0522 818 Gene3D Endonuclease Chain A 495 712 - -
Vvi11g0522 818 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Vvi11g0522 818 Gene3D Endonuclease Chain A 200 451 - -
Vvi11g0522 818 Gene3D C2 domain 7 154 IPR035892 -
Vvi11g0522 818 Pfam Phospholipase D C terminal 736 808 IPR024632 -
Vvi11g0522 818 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 664 691 IPR001736 GO:0003824
Vvi11g0522 818 FunFam Phospholipase D 477 710 - -
Vvi11g0522 818 FunFam Phospholipase D delta 200 454 - -
Vvi11g0522 818 Pfam Phospholipase D Active site motif 337 374 IPR001736 GO:0003824
Vvi11g0522 818 Pfam Phospholipase D Active site motif 665 691 IPR001736 GO:0003824
Vvi11g0522 818 SMART pld_4 664 691 IPR001736 GO:0003824
Vvi11g0522 818 SMART pld_4 336 374 IPR001736 GO:0003824
Vvi11g0522 818 Pfam C2 domain 10 123 IPR000008 -
Vvi11g0522 818 SMART C2_3c 10 124 IPR000008 -
Vvi11g0522 818 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 148 IPR035892 -
Vvi11g0522 818 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 374 IPR001736 GO:0003824
Vvi11g0522 818 SUPERFAMILY Phospholipase D/nuclease 150 454 - -
Vvi11g0522 818 SUPERFAMILY Phospholipase D/nuclease 498 748 - -
Vvi11g0522 818 PANTHER PHOSPHOLIPASE D 5 806 IPR015679 -
Vvi11g0522 818 CDD C2_plant_PLD 6 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0522 Vvi-Chr11 4696541 4699271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0522 2 818 Phospholipase D Gene Family (Wang group) AT1G52570 69.306 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0522 K01115 - vvi:100261040 1689.09