Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0514 ATGGTGCAAATGGAACCCAAATGGCTGGTTTTGTTGGTAGTGATTCTGGGGTTAAGTTGGTTTGGAGAAACCCAACAAGGATTGATACCCGGGTTTTACTCTTCTTCATGCCCAAAGGCTGAGGCCATAGTCAGTTCTACTGTTGTAACGCATTTCAAGAAGGATCCTACAATTGCAGCGGGCGTTCTCAAGCTTCATTTCAAAGATTGCTTTTTTCAGGGCTGCGATGGTTTAGTAAGTGAGATAGATGCATTGACTGACACAGAAATACGAGGATTTGGTGTGATAGATGACGCCAAAACTCAACTGGAGACCTTGTGCCCCGGGGTGGTATCATGTGCTGATATACTGGCACTTGCTGCTCGTGATGCTGTTGGCTTGAGTGGTGGTCCAAGTTGGCCAGTGCCCACAGGAAGACGAGATGGGAGGCTCTCATTTGGTGTATCCCCGGAGAACCTTACTTTACCTGTTCCTACTGATTCTATTCCTGTCCTAAGAGAGAAGTTTGCTGCTAAAGGCCTCAACAATCACGACCTTGTAACACTAATTGGGGCACACACCATTGGACTAACGGACTGTTCGTCCTTTGAATACCGTCTCTACAACTTCACGGCAAAGGGAAATGCAGACCCAACAATAAACCAAGCTTTCCTGGCTCAGCTGCGAGCCCTTTGTCCTGATGTTGGTGGCGATGTCTCCAAAAAGGGGGTGCCGCTGGATAAAGATAGCCAGTTCAAATTCGATGTCAGTTTCTTCAAGAATGTGCGGGATGGGAATGGAGTCCTGGAGTCCGATCAAAGGCTTTTTGGAGATAGCGAAACCCAGAGAATCGTTAAGAATTATGCTGGTAACGGAAAAGGCTTACTGGGGCTTAGATTTTATTTTGAGTTTCCAAAAGCCATGATTAAAATGAGTAGCATCGGGAGACGAGAGCCAACTGAGAGTTTTGCTTCTCTTTTCTACTTGTTAATGGTGCAAATGGAACCTAAATGGCTGGTTTTGTTGGCAGTGATTTTAAGTTTGTTTGCAGAAACTCAACAAGGATTGACATCCGGGTTTTACTCTTCTTCATGCCCAAAGGCTGAGGCCACAGTCAGGTCCACTGTTGAAACGCACTTCAAGCAGGATCCTACAATTGCAGCTGGTGTTCTTAGGCTTCATTTCCAAGATTGCTTTGTTCAGGGCTGCGACGCTTCGATACTGATAACTGAGGCTTCAGGTGAGACAGATGCATTGCCCAACGCAGGATTAAGAGGATTTGATGTGATAGATGACGCCAAAACTCAACTGGAGGCCTTGTGCCCCGGGGTGGTATCATGTGCTGATATACTAGCACTAGCTGCTCGTGATGCTGTTGGCTTGAGTGGTGGTCCAAGTTGGTCAGTGCCCACAGGAAGACGAGATGAGACGAACGTATCTTCATCCCCGGATGCCTCTAATTTCCCTGCTCCTAATGATTCTATTCCTGTCCTAAGACAGAAGTTTGCTGATAAAGGCCTCAACACTAATGACCTTGTAACACTAGTTGGGGCACACACCATTGGGCAAACGAACTGTTCGGTCTTCCAATACCGTCTCTACAACTTCACGACAAGGGGAAATGCAGACCCAACAATAAACCCAGCTTTCCTTGCTCAGCTGCAAGCCCTTTGTCCTGAAGGTGGCAATGGCTCCACAAGGGTGGCGCTGGATACAAATAGCCAGACCAAATTCGATGTCAATTTCTTCAAGAATGTGCGGGATGGGAATGGAGTCCTGGAGTCGGATCAAAGGCTTTTTGGAGATAGCGAAACTCGGAAGATCGTTAGGAATTATGCTGGTAACGGAAGAGGCATACTGGGGCTTAGATTTTATATTGAGTTTCCAAAAGCCATGATTAAAATGAGTAGCATCGGGGTCAAGACTGGTACTCAAGGAGAGATTCGAAAGACATGCTCAAAGTCCAATTAA 1950 0.4651 MVQMEPKWLVLLVVILGLSWFGETQQGLIPGFYSSSCPKAEAIVSSTVVTHFKKDPTIAAGVLKLHFKDCFFQGCDGLVSEIDALTDTEIRGFGVIDDAKTQLETLCPGVVSCADILALAARDAVGLSGGPSWPVPTGRRDGRLSFGVSPENLTLPVPTDSIPVLREKFAAKGLNNHDLVTLIGAHTIGLTDCSSFEYRLYNFTAKGNADPTINQAFLAQLRALCPDVGGDVSKKGVPLDKDSQFKFDVSFFKNVRDGNGVLESDQRLFGDSETQRIVKNYAGNGKGLLGLRFYFEFPKAMIKMSSIGRREPTESFASLFYLLMVQMEPKWLVLLAVILSLFAETQQGLTSGFYSSSCPKAEATVRSTVETHFKQDPTIAAGVLRLHFQDCFVQGCDASILITEASGETDALPNAGLRGFDVIDDAKTQLEALCPGVVSCADILALAARDAVGLSGGPSWSVPTGRRDETNVSSSPDASNFPAPNDSIPVLRQKFADKGLNTNDLVTLVGAHTIGQTNCSVFQYRLYNFTTRGNADPTINPAFLAQLQALCPEGGNGSTRVALDTNSQTKFDVNFFKNVRDGNGVLESDQRLFGDSETRKIVRNYAGNGRGILGLRFYIEFPKAMIKMSSIGVKTGTQGEIRKTCSKSN* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0514 649 CDD secretory_peroxidase 27 308 IPR033905 GO:0004601|GO:0042744
Vvi11g0514 649 ProSiteProfiles Plant heme peroxidase family profile. 348 649 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 SUPERFAMILY Heme-dependent peroxidases 349 649 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 Gene3D - 28 158 - -
Vvi11g0514 649 FunFam Peroxidase 352 486 - -
Vvi11g0514 649 PRINTS Haem peroxidase superfamily signature 380 394 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Haem peroxidase superfamily signature 456 468 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Haem peroxidase superfamily signature 438 455 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Haem peroxidase superfamily signature 564 579 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Haem peroxidase superfamily signature 504 519 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PANTHER PEROXIDASE 25-RELATED 337 637 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 MobiDBLite consensus disorder prediction 464 482 - -
Vvi11g0514 649 FunFam Peroxidase 156 304 - -
Vvi11g0514 649 PRINTS Plant peroxidase signature 623 636 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 562 577 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 578 595 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 437 447 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 418 431 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 456 471 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 503 515 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 382 402 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 PRINTS Plant peroxidase signature 358 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 ProSitePatterns Peroxidases proximal heme-ligand signature. 504 514 IPR019793 -
Vvi11g0514 649 CDD secretory_peroxidase 348 647 IPR033905 GO:0004601|GO:0042744
Vvi11g0514 649 ProSiteProfiles Plant heme peroxidase family profile. 27 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 SUPERFAMILY Heme-dependent peroxidases 28 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 Gene3D Peroxidase, domain 2 159 304 - -
Vvi11g0514 649 FunFam Peroxidase 482 628 - -
Vvi11g0514 649 MobiDBLite consensus disorder prediction 454 485 - -
Vvi11g0514 649 Gene3D - 352 649 - -
Vvi11g0514 649 Pfam Peroxidase 365 607 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 Pfam Peroxidase 45 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g0514 649 Gene3D Peroxidase, domain 2 482 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0514 Vvi-Chr11 4611417 4626665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0514 331 649 Peroxidase AT2G41480 64.375 9.09e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0514 K00430 - vvi:100855242 654.055