LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi11g0478	ATGGCCACCGTAACCAGAGACGATTCCGACTACGACAGCAGCTGTTCTTCAATCACGGTGCCCGACTCCAGCCGGAGCTGGATGAGCAACCTCAGCTTTGGCAGCCGGAGCTCCGTCTCCGTCTGTTCCTCCGCTGACACCTCCCACAAGCCTCACAAGGCAAACCAAGCCGCCTGGGAAGCCATGAAGCGGCTCCGGGGCGAGAAAGGGCGAGTGGGGCTGGACCACTTCCGGATGCTCCGGCGGCTGGGAAGTGGGGATATCGGTAATGTTTATTTATGCCAGATTCGGAACCCGGTGGTGGGGTTGCCGCAGAGCTTTTACGCGATGAAGGTGGTGGATAGGGAGGCTCTTGCTATAAGGAACAAGTTGCAGAGGGCTGAGATGGAGAAGGAGATACTGGGTATTCTTGATCACCCCTTTTTGCCTACTCTCTACGCTGAGTTTGATGCTTCGCACTACTCCTGCTTGGTTATGGAGTTCTGTCCTGGTGGAGACTTACACGCTGCTCGGCAGCGACAGCCCGGAAAGCGGTTTAGCATTTCTTCAGCAAAGTTTTATGCTGCAGAGACTCTGGTGGCTCTGGAGTATCTCCACATGATGGGTGTTGTTTACAGAGACCTCAAGCCCGAAAATGTGCTCGTCAGAGAGGACGGCCACATCATGCTTTCGGACTTCGATCTTTCCCTCAAATGCGACGTGGTTCCCAAGCTCCTGCGACCAAAGCCAGACCAAGAAGCCACTGGGAAGAAGGTGAAAAGCTCGACACCTTCTTGTGCTACACCCATGCAGCCAGTGCTCTCCTGTTTCTCGGCCTCCAACAAGAAAAAGAAAGGTTCAGTCAGAACAATAGTAGCATCACAAGCTGATGACGTCCAAGAAATCGATCCAGAATTGGTGGCTGAACCCATCAACGCTCGATCCAAGTCCTTCGTAGGCACCCACGAGTACTTAGCCCCGGAAGTGATCTCAGGACAAGGCCATGGAAGTGCAGTGGACTGGTGGACTCTCGGGGTGTTCTTATACGAGCTTCTCTACGGAAGAACACCCTTCAAAGGTGAAAACAACGAAAAAACCCTCATCAACATTTTGAAACAGCCCTTAACCTTCCCAAGAATTGGAGTTAGCAGTAGCAAAGAATTTGAAGAGATGGTCAAAGTCCAAGACCTCATTAGCAAGCTTCTGGTCAAGAATCCCAAGAAAAGAATCGGAAGCTTGAAGGGCTCCGTAGAGATCAAGAGGCACGAGTTCTTCAAGGGTGTGAACTGGGCATTGATCAGGTCAGTGAAACCACCAGAGGTCCCCAGAGACCATCTCCAGAAGATCATAAGGAGTAGAGCTTCCTTACCAAAGCTCAGCAAGAAAGAAAGAGACGCACCATATCAGATCCCTCATCATTTTGACTACTTCTAA	1413	0.5145	MATVTRDDSDYDSSCSSITVPDSSRSWMSNLSFGSRSSVSVCSSADTSHKPHKANQAAWEAMKRLRGEKGRVGLDHFRMLRRLGSGDIGNVYLCQIRNPVVGLPQSFYAMKVVDREALAIRNKLQRAEMEKEILGILDHPFLPTLYAEFDASHYSCLVMEFCPGGDLHAARQRQPGKRFSISSAKFYAAETLVALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRPKPDQEATGKKVKSSTPSCATPMQPVLSCFSASNKKKKGSVRTIVASQADDVQEIDPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYELLYGRTPFKGENNEKTLINILKQPLTFPRIGVSSSKEFEEMVKVQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGVNWALIRSVKPPEVPRDHLQKIIRSRASLPKLSKKERDAPYQIPHHFDYF*	471

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi11g0478	470	SUPERFAMILY	Protein kinase-like (PK-like)	62	439	IPR011009	-
	Vvi11g0478	470	Gene3D	Phosphorylase Kinase; domain 1	75	161	-	-
	Vvi11g0478	470	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	203	215	IPR008271	GO:0004672\|GO:0006468
	Vvi11g0478	470	Gene3D	Transferase(Phosphotransferase) domain 1	306	436	-	-
	Vvi11g0478	470	PANTHER	FLIPPASE KINASE 1-RELATED	26	440	-	-
	Vvi11g0478	470	Gene3D	Transferase(Phosphotransferase) domain 1	162	231	-	-
	Vvi11g0478	470	CDD	STKc_phototropin_like	75	436	-	-
	Vvi11g0478	470	Pfam	Protein kinase domain	78	231	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi11g0478	470	Pfam	Protein kinase domain	308	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi11g0478	470	FunFam	protein kinase PINOID	162	230	-	-
	Vvi11g0478	470	FunFam	protein kinase PINOID 2	75	161	-	-
	Vvi11g0478	470	ProSiteProfiles	Protein kinase domain profile.	77	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi11g0478	470	SMART	serkin_6	77	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi11g0478	470	MobiDBLite	consensus disorder prediction	1	24	-	-
	Vvi11g0478	470	FunFam	serine/threonine-protein kinase D6PK-like	306	436	-	-
	Vvi11g0478	470	Coils	Coil	110	130	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi11g0478	Vvi-Chr11	4223684	4225253	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi11g0478	7	470	AGC Kinase Gene Family	AT2G26700	60.229	0.0	600

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Vvi11g0478		Pkinase	1.2e-30	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi11g0478	K08286		-	vvi:100242344	919.842