Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0470 ATGGGAAGCTCTGCGCCCGGCGTCGCCGGCGATCGAACGGCCAGCATAAATGGCGGTGGCGCCACTGTCATTGACAAGGGCGTCGACTTCGCCAACTATTTCTGCACTTACGCTTTTCTCTATCACCAGAAGGAGATGCTCTCCGATCGAGTTCGTATGGACGCTTACTACAACGCCATTTTCGAGAACAAGCACCACTTCCGCGGAAAGGCTGTGTTGGATGTAGGAACTGGGAGTGGCATTCTTGCAATCTGGTCAGCACAAGCAGGTGCAAGGAAGGTCTATGCAGTGGAAGCAACTAAGATGTCAGAACATGCTCGTGAACTGGTTAAGGCAAATAATCTTCAAGATATTGTTGAAGTGATTGAAGGCTCTGTGGAGGATGTTACACTGCCAGAGAAAGTTGATGTCATTATATCAGAATGGATGGGATATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTGATTTCTGCACGTGATCGCTGGTTGAAGCCAACTGGAGTTATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGGTCTGGATTGGTAGATCAAAAAAAGAATGATTATGAAGGATCTATGAATGACTGGCTTTGCTTTGTGAACGAGACTAAAAATGATTATGGTGTTGATATGAGCGTTCTAACAAAGCCTTTCTCTGAAGAGCAGAGGAAATATTATCTACAGACATCATTGTGGAACAACCTTCATCCACATCAAGTTGTAGGAACTGCTGCCATCATAAAGGAGATTGATTGTTTAACGGCAACTGTGGATGACATCTGTGAAGTTAGATCAAACTTTTCATCATCAATTTTGATAGAGAACACTAGGCTCTGTGGGTTTGGTGGATGGTTTGATGTCCATTTTCGAGGAAGGAGTGATAATCCAGCTCAACAGGAGATTGAGTTGACAACTGCTCCCAGTCTAGATTCTAGCACCCATTGGGGACAGCAGGTTTTCCTCTTGCATCCTCCTTTTCGCACCAGTGAAGGGGATGATGTGAATGTTTCTTTCTTAATGAATCGCTCTAAAGAAAACCATCGACTGATGGAGGTTGATCTCGGTTGCGAGATAAGGCAGTCTTCGGGAAAACTTCTTCCACTTTTCAAAAACAAGTTCTATATAGAATGA 1146 0.4424 MGSSAPGVAGDRTASINGGGATVIDKGVDFANYFCTYAFLYHQKEMLSDRVRMDAYYNAIFENKHHFRGKAVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARELVKANNLQDIVEVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWMAPIRSGLVDQKKNDYEGSMNDWLCFVNETKNDYGVDMSVLTKPFSEEQRKYYLQTSLWNNLHPHQVVGTAAIIKEIDCLTATVDDICEVRSNFSSSILIENTRLCGFGGWFDVHFRGRSDNPAQQEIELTTAPSLDSSTHWGQQVFLLHPPFRTSEGDDVNVSFLMNRSKENHRLMEVDLGCEIRQSSGKLLPLFKNKFYIE* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0470 381 Gene3D - 174 381 - -
Vvi11g0470 381 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 31 366 IPR025799 GO:0016274|GO:0018216
Vvi11g0470 381 FunFam Protein arginine N-methyltransferase PRMT10 27 172 - -
Vvi11g0470 381 CDD AdoMet_MTases 72 171 - -
Vvi11g0470 381 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 27 358 IPR025799 GO:0016274|GO:0018216
Vvi11g0470 381 FunFam Protein arginine N-methyltransferase PRMT10 174 381 - -
Vvi11g0470 381 Gene3D Vaccinia Virus protein VP39 29 172 IPR029063 -
Vvi11g0470 381 Pfam Ribosomal protein L11 methyltransferase (PrmA) 68 143 - -
Vvi11g0470 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0470 Vvi-Chr11 4126320 4146057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0470 32 334 C2H2 Transcription Factor Family AT3G12270 33.025 5.34e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0470 K11434 - vvi:100262845 780.4