Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0461 ATGTTGGAATTACAGGGGGTGGTGAGTGAATTTCGCATTCCTAAGGATGAAGATCCAAACTCAGAGAAGTATCAATTCCAGTGGCTATATTCAAACGGGTTGCTAGCTATCATATTCTCATTTGGCCTACTATTTACTGCCCTAAAGAGCAGAAGGGCAAGATCATGGTCGTATGGTACAGGGTGGTCCCGAGGTTTCATTGCAGACTATGGTGTTCCTTTGATGGTGTTAGTATGGACAGCTTTGTCATTCAGTGTGCCTAGCAAAGTTCCTTCTGGAGTTCCCAGGAGGCTTTTTAGTCCTCTTCCTTGGGAATCTGCTTCATTGCAGCATTGGATAGTGATCAAGGATATGGGGAAGATCCCTCCAGCATACATCCTTGCTGCCATCATACCAGCTGTGATGATAGCGGGTCTTTACTTTTTTGACCACAGTGTGGCTTCACAAATGTCGCAGCAAAAGGAGTTCAATCTCAAGAACCCATCTGCTTATCATTATGACATCTTATTGCTTGGTGTTATGACTTTGCTCTGTGGATTTCTTGGACTCCCTCCCTCAAATGGGGTACTCCCACAATCTCCCATGCACACTAAGAGCCTTGCCGTTCTCAAGAGACGGTTAATCCGAAGGAAGATGGTACAGAGTGCTAAGGAATGCATAAAGCAACAAGCTAGCAACACTGAGATTTACAGGAAGATGCAGGCTGTTTTTATAGAAATGGACATGGCTCCATCACTATTAGTCACTGAAGAGCTAAAGGACTTGAAGGAAGCAATCATGAAGGGTGAAGATGGAAAAAATGCGGACGATAAATTTGACCCTGAAAAGCACATTGATGATTACTTGCCTGTCCGGGTTAACGAGCAAAGAGTGAGCAACCTGTTACAATCTATTCTCGTGGGAGCATCAGTATTTTCCATGCCCATTATCAGGAGGATTCCTACATCAGTTCTCTGGGGATATTTTGCCTATATGGCCATTGACAGCCTTCCTGGAAACCAGTTCTGGGAAAGAATGTTGCTTCTTTTCATTACTCCTGCCCGGCGCTACAAGGTGTTGGAAGGGGTTCATGCTTCGTTTGTGGAATCAGTGCCCTTCAAATATATTTTCATGTTTACCCTATTCCAGTTTGTGTACCTTCTGGTGTGTTTTGGAGTAACATGGATTCCCATAGCTGGAATATTGTTTCCCTTGCCATTCTTTCTGCTTATAATCATAAGACAGCATGTCCTCCCAAAACTATTCCACCCCCATGACCTCCAGGAGCTGGATGCAGCCGAGTACGAGGAAATTGCTGGTGTTTGGAGCCACAGTCGTACTTTCAAATTCAAGGACCTTGAGCCAACTCATTCAGGGCATAAAGAGGGTGAAGTAGAAATTTGTGATGCCGAGATATTGGATGAGCTGACCACCAGTAGAGGAGAGTTAAAGCTTAGATCTCTAAGCTGTCCGGCAGATTGGATCTCTCAGGTTCATCCGAAGAAAGATGAAGAACATAACGATAGAGACACCAATGAAGCATGA 1524 0.4442 MLELQGVVSEFRIPKDEDPNSEKYQFQWLYSNGLLAIIFSFGLLFTALKSRRARSWSYGTGWSRGFIADYGVPLMVLVWTALSFSVPSKVPSGVPRRLFSPLPWESASLQHWIVIKDMGKIPPAYILAAIIPAVMIAGLYFFDHSVASQMSQQKEFNLKNPSAYHYDILLLGVMTLLCGFLGLPPSNGVLPQSPMHTKSLAVLKRRLIRRKMVQSAKECIKQQASNTEIYRKMQAVFIEMDMAPSLLVTEELKDLKEAIMKGEDGKNADDKFDPEKHIDDYLPVRVNEQRVSNLLQSILVGASVFSMPIIRRIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPARRYKVLEGVHASFVESVPFKYIFMFTLFQFVYLLVCFGVTWIPIAGILFPLPFFLLIIIRQHVLPKLFHPHDLQELDAAEYEEIAGVWSHSRTFKFKDLEPTHSGHKEGEVEICDAEILDELTTSRGELKLRSLSCPADWISQVHPKKDEEHNDRDTNEA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0461 507 Pfam HCO3- transporter family 284 374 IPR011531 GO:0006820|GO:0016020
Vvi11g0461 507 Pfam HCO3- transporter family 30 206 IPR011531 GO:0006820|GO:0016020
Vvi11g0461 507 PANTHER ANION EXCHANGE PROTEIN 5 432 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0461 Vvi-Chr11 4038043 4041815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0461 4 505 Antiporters AT1G15460 66.928 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0461 K24194 - vvi:100244133 989.564