Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0446 ATGGAGTTAGGACAGCTCAGAACAATTGACAATGTGGAAGAAAATGGTGATGAGGAAGCTCTCAAATGGGCTGCTCTTGAAAGACTCCCCACTTATGATCGAGCCCGGAAAGGGATCTTTAATGGAGATGCAGGAGAATCTAAAGGAGTTGATCTTCGGAAGCTTGGATTTCAGGAGAGGGAGGAGTTGTTGAACAGAGTCATTAGACATGCAGATGATAATGAAGAGTTCTTACGGAAGCTCAAGAACAGAATGGACAGGGTTTCTCTGGACTTACCTACAATTGAAGTTCGATTTGAGAATCTAAATGTTGAAGCCGAGGCCTATGTGGGAAGCAGAGCTTTGCCTACAATCCTCAACTCTTATTTTAATCAGATAGAGGGTCTGTTAAACTTTCTCCATATTCTTCCAAGTAAGAAGAGGAAAATATCGGTACTTCACAATACTAGTGGAATTATCAAGCCTGGAAGAATGACTTTGCTTCTAGGACCACCAAGCTCGGGGAAAACCACCTTATTGTTAGCCCTGTCAGGTAAACTTGATTCAGAACTGAAGTTTTCTGGGAAAGTAACATACAATGGCTATGAAATGCATGAATTTGTCCCTCAGAGGACTTCAGCGTATATCAGCCAGGAAGATGTCCACATCAGTGAATTGACAGTGAGAGAAACACTAACTTTTGCTGCAAGATGCCAAGGAGTTGGTACTAATTATGATGCACTCATGGAGTTGCTGAGAAGAGAGAAGGAAGCAAATGTCAAACCAGACAGCGACATAGATATGTATATGAAGGCAGCAGTTTTAACAGGACATAAGGAAGACATAGTTACAAACTATATTCTTAAGATTTTAGGACTTGAAGTTTGTGCTGATACCATAGTTGGAGATGTAATGAGAAGAGGTATTTCTGGTGGACAGAAGAAACGCGTTACAATAGGGGAGATGCTGGTGGGACCTTCCATGGCATTCTTCATGGATAATATATCCACTGGTCTTGACAGTTCAACAACTTTTCAGATCATCAACTCTATCAAGCAGTCAATCCATATTCTCAACAAGACCACTCTTATCTCCCTCCTCCAGCCTGCACCAGAAACTTATGATCTCTTTGATGACATTATTCTGATCTCAGAAGGGCAGATTGTGTACCAGGGCCCATGTGAATATGTCCTTGAGTTCTTTGAATCTATGGGTTTCAGATGTCCTGAGAGGAAAGGCATTGCTGACTATTTACAGGAAGTAACATCAAGAAAGGATCAGAAACAGTACTGGGCTAATGAAGCCAAACCATATAGTTATGTTTCGATCAATGAGTTTACAGAGGCTTTTAAGGCATTCCATGTTGGCAGAGCCATCCAATGCGAGCTTGCAACCCCGTTCAACAGGGCAAGGAGCCATCCAGCAGCTTTGACAAAATCCAAATATGGAACTAGCAAGAAGGAACTATTGAAAGCTTGTTTATCAAGAGAATTTATTTTGATGAAGAGGAACTCATCTCTATATGCTTTCAAGCTACTTCAGTTTGTATTTACGGCAATCATTGTGGCAACAATCTTCACAAGAAGCAATATGCATCACAAGGAATTAAAAGATGGAACCATCTATCTTGGTGCTCTCTATTTTGGGCTCACTGTAACTCTCTTCAGTGGATTTTTTGAACTTTCAATGACAATTGGGAAACTCCCCGTCTTCTATAAGCAAAGGGACCTCCTGTTTTATCCTTCATGGGCATACTCATTGCCTACACCGATGCTTGGGACTATTCTATCCATTCTTGAAGTTACCCTTTGGATAGCCATAACTTATTATGCAATAGGCTTTGATCCCGATCTCAAAAGGCAAGCAAGAATATATATACATATATTCATGTTAATGGCTTCTCTTAGTTTCTCCCCACTAACCCAGATGTCTAAACAATATCTTATTCTCGCAATGAATGGACAGATGTCTTATGGATTTTTCAGGTGCATTGCTGCATTAAGTAGGAACTTTGTTATTGCAAACACAAGCGCGCACGTTGCACTTATATGGCTACTAATATTCAGTGGATTTGTCTTAGCACGAGAGAATATAACGAAATGGTTGAGCTGGGGGTACTGGACATCTCCCCTCATGTATGTTCAAAATGCACTTTCAGTGAATGAATTCCTTGGGGAGAAATGGAAGGCAAGGATACCTGTGTCTACTGGATCAACAGCACCATCACTGGGAATATCTGTCTTGAAGTCACGTTGTTTGTTCACCAATCCAGATTGGTATTGGATTGGTTTTGGTGCACTAATCTGTTTCATCTTCTTATTCCATGGGATCTACAATTTGGCTCTTGCATATCTCAATGAATATGGGAAATCTCGAGCGGTCTTTTTATCTGAAGAAGCTTTGAAGGAGAAGCACATCAACAGGACAGGTGAGGAAAACAGGACCTCAGAGTATGGAGCACACTCAAATGGAAACAAAGCATCCAGAAGTAAGTTCAATGAGCCCCCAATTTATGAAGCTGGTGATGTTGGAAAATACCAGGAGAAAGGCATGCTTCTCCCATTTAGACCTCTTACCATTGCATTTGAGAATATCAGATATTCAGTTGATATGCCACAGGCAATGAAAGCGCAAGGTGTTGAAGTCAATCGATTAGTACTTCTGAAGGGACTGAATGGAACTTTCAGGCCTGGAGTGCTTACAGCACTGATGGGTGTTAGTGGAGCTGGGAAGACCACTCTCCTAGACATGTTGTCGGGAAGGAAAAACATCGGATACATAGAGGGAAACATCACAGTCTCAGGCTACCCCAAGAAACAGGAAACCTTTGCTCGGGTTTCTGGATACTGTGAACAAAATGACATTCACTCCCCACTTGTTACAGTGTACGAGTCCCTATTATACTCAGCATGGCTAAGGTTACCTGCAGAGATCAACCCTGAGACTAGAGAGATTTTCATTCAGGAAGTTATGGAACTGATTGAACTGACACCATTAGGAGAAGCATTGGTTGGATATCCAAATGTGAATGGGCTCTCCGTTGAGCAGCGCAAAAGGCTAACCATTGCAGTTGAGCTTGTTGCAAACCCCTCAATAATATTCATGGACGAGCCGACATCAGGCCTTGATGCCAGAGCAGCATCCATTGTTATGAGAGCTGTCAGGAAGATCGTGGACACTGGAAGAACGGTAGTGTGCACAATCCATCAACCAAGTATTGACATATTCGAGTCTTTCGATGAGCTTTTTCTACTGAAGAGAGGAGGTGAAGAAATATATGTGGGTCCTTTGGGACATCAGGCCGGCCATATGATCAAATACTTTGAGGAAATCAATGGAGTTGATAGGATTAAAGATGGTTATAACCCAGCAACATGGGTGTTGGAAGTGACTACTGATGCACAAGAAGAGTTTCTTGGAGTCAAATTTGCAGAAATATACAAAAAATCAGATCTTTTCCAGAGAAACAAAGCTTTGATCAAGGAGTTGAGTACACCTCCTCCCAATTCACAAGACCTCAACTTCTCTTCTCAGTATCCAAGGTCCTTCCTTACCCAGTTCAAAGCCTGCCTATGGAGGTATTACAAGTCCTATTGGCGCAACACAGCATACAACTCCCTTAGATTTCTAGCCAGCACTATGGAGGCCTTCATGTTGGGCATTACATTTTGGGGCCTTGGGTCCAACAGGAGAACAGGACTGGATATTTTCAATGTCTTGGGTTCTTTACACACGGCGGTTATGTTCTTGGGCACACAGAATGCTTCAATTGCGCGGCCGGTTGTTATCATGGACAGGGCGGTTTTCTACAGAGAGAGGGCTGCTGGGTTCTACTCTGCCTTGCCTTGTGCAATTGCACAGATTGCAATTGAGATCCCATACACTTTGACTCAGGCCATTATATATGGGATAATAGTGTATACCATGATGGGATTGGAACTGAAAGCTGCAAAGTTTCTCCTGTACCTATTATTTCAGATCCTCTCACTTCTGTACTTCACATACTACGGAATGATGATTATAGCAGTGAGTCCTAATCAAGAAATTGCAACCCTGTTGTCTGCTCTCTTCTACACACTTTGGAATATCTTCTCAGGCTTTATAATTCCCAGAAAGAGAATCCCTGTGTGGTGGAGGTGGTATGCTTGGGTGTGCCCTGTTGCATGGAGTTTGTATGGATTTGCTGCATCACAATATGGAGACGTGCAGACGAAGATGGAAAGTAGTGAAACAGTGGCGGAGTACATGAGAAATTATTTTGGATACAGACACGACTTCTTAGGGGTTGTTTGTATGGTGCTGATTGGGTTTAATGTGCTCTTCGCTTCTGTGTTTGCTTACTCCATGAAGGCCTTGAACTTCCAGAAAAGATGA 4353 0.4229 MELGQLRTIDNVEENGDEEALKWAALERLPTYDRARKGIFNGDAGESKGVDLRKLGFQEREELLNRVIRHADDNEEFLRKLKNRMDRVSLDLPTIEVRFENLNVEAEAYVGSRALPTILNSYFNQIEGLLNFLHILPSKKRKISVLHNTSGIIKPGRMTLLLGPPSSGKTTLLLALSGKLDSELKFSGKVTYNGYEMHEFVPQRTSAYISQEDVHISELTVRETLTFAARCQGVGTNYDALMELLRREKEANVKPDSDIDMYMKAAVLTGHKEDIVTNYILKILGLEVCADTIVGDVMRRGISGGQKKRVTIGEMLVGPSMAFFMDNISTGLDSSTTFQIINSIKQSIHILNKTTLISLLQPAPETYDLFDDIILISEGQIVYQGPCEYVLEFFESMGFRCPERKGIADYLQEVTSRKDQKQYWANEAKPYSYVSINEFTEAFKAFHVGRAIQCELATPFNRARSHPAALTKSKYGTSKKELLKACLSREFILMKRNSSLYAFKLLQFVFTAIIVATIFTRSNMHHKELKDGTIYLGALYFGLTVTLFSGFFELSMTIGKLPVFYKQRDLLFYPSWAYSLPTPMLGTILSILEVTLWIAITYYAIGFDPDLKRQARIYIHIFMLMASLSFSPLTQMSKQYLILAMNGQMSYGFFRCIAALSRNFVIANTSAHVALIWLLIFSGFVLARENITKWLSWGYWTSPLMYVQNALSVNEFLGEKWKARIPVSTGSTAPSLGISVLKSRCLFTNPDWYWIGFGALICFIFLFHGIYNLALAYLNEYGKSRAVFLSEEALKEKHINRTGEENRTSEYGAHSNGNKASRSKFNEPPIYEAGDVGKYQEKGMLLPFRPLTIAFENIRYSVDMPQAMKAQGVEVNRLVLLKGLNGTFRPGVLTALMGVSGAGKTTLLDMLSGRKNIGYIEGNITVSGYPKKQETFARVSGYCEQNDIHSPLVTVYESLLYSAWLRLPAEINPETREIFIQEVMELIELTPLGEALVGYPNVNGLSVEQRKRLTIAVELVANPSIIFMDEPTSGLDARAASIVMRAVRKIVDTGRTVVCTIHQPSIDIFESFDELFLLKRGGEEIYVGPLGHQAGHMIKYFEEINGVDRIKDGYNPATWVLEVTTDAQEEFLGVKFAEIYKKSDLFQRNKALIKELSTPPPNSQDLNFSSQYPRSFLTQFKACLWRYYKSYWRNTAYNSLRFLASTMEAFMLGITFWGLGSNRRTGLDIFNVLGSLHTAVMFLGTQNASIARPVVIMDRAVFYRERAAGFYSALPCAIAQIAIEIPYTLTQAIIYGIIVYTMMGLELKAAKFLLYLLFQILSLLYFTYYGMMIIAVSPNQEIATLLSALFYTLWNIFSGFIIPRKRIPVWWRWYAWVCPVAWSLYGFAASQYGDVQTKMESSETVAEYMRNYFGYRHDFLGVVCMVLIGFNVLFASVFAYSMKALNFQKR* 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0446 1450 Gene3D - 856 1097 IPR027417 -
Vvi11g0446 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 853 1105 IPR003439 GO:0005524
Vvi11g0446 1450 Pfam ABC-transporter N-terminal 72 120 IPR029481 -
Vvi11g0446 1450 Pfam ABC transporter 881 1033 IPR003439 GO:0005524
Vvi11g0446 1450 MobiDBLite consensus disorder prediction 809 823 - -
Vvi11g0446 1450 Pfam ABC transporter 146 327 IPR003439 GO:0005524
Vvi11g0446 1450 MobiDBLite consensus disorder prediction 799 826 - -
Vvi11g0446 1450 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 12 1450 - -
Vvi11g0446 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Vvi11g0446 1450 Gene3D - 134 444 IPR027417 -
Vvi11g0446 1450 FunFam ABC transporter G family member 34 133 437 - -
Vvi11g0446 1450 Pfam ABC-2 type transporter 482 716 IPR013525 GO:0016020|GO:0140359
Vvi11g0446 1450 Pfam ABC-2 type transporter 1178 1392 IPR013525 GO:0016020|GO:0140359
Vvi11g0446 1450 CDD ABCG_PDR_domain2 850 1088 IPR034003 -
Vvi11g0446 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 876 1089 IPR027417 -
Vvi11g0446 1450 CDD ABCG_PDR_domain1 135 385 IPR034001 -
Vvi11g0446 1450 ProSitePatterns ABC transporters family signature. 302 316 IPR017871 GO:0005524|GO:0016887
Vvi11g0446 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 130 403 IPR003439 GO:0005524
Vvi11g0446 1450 Pfam Plant PDR ABC transporter associated 730 787 IPR013581 -
Vvi11g0446 1450 FunFam ABC transporter G family member 40 867 1097 - -
Vvi11g0446 1450 Pfam ABC-2 type transporter 361 414 IPR043926 GO:0140359
Vvi11g0446 1450 SMART AAA_5 890 1082 IPR003593 GO:0016887
Vvi11g0446 1450 SMART AAA_5 155 387 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0446 Vvi-Chr11 3891469 3898727 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0446 880 1065 Calmodulin-binding Proteins AT2G36910 25.926 5.49e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0446 K08711 - vvi:100256034 2779.2