Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0402 ATGGAAAACTCTCGTGAATCTGAAGTCACCGTGAATTTCTCCGACCGTCGGAACTTTGCCACCGTCCTCAGATCTGATCTCAAGGAGACCTTCTTTGCCGATGATCCTTTCCAGGAGTTCCGGAATGAACCGCCGAAGCGTCGAACCATAAAAATCTTCCAATATTGTGTTCCCATGTTAGAATGGCTACCCAAATATAATTTCCAATTCTTTAGATATGATTTTCTGGCGGGGATCACCATCGCCAGCCTCGCCATACCTCAGGGGATCAGTTACGCTAAGCTCGCTGAGATTCCTCCCATCATTGGCCTGTATTCGAGTTTTATCCCGCCTTTTGTGTACGCTGTGTTTGGGACCTCCAAGTATCTTGCAGTGGGAACCATAGCTGCGTCGTCCTTGCTTATAGCTTCTACCATTAAAGAAAAAGTGTCCCCGGATGAGGATCCAACATTGTATCTTAATTTGGTCTTCACGACTGCGTTCTGCACTGGGATCTTACAGACAATCTTAGGTGTTCTAAGACTGGGGATTTTGGTGGATTTCTTATCGCATTCCACCATCACCGGCTTCATGGGAGGCACAGCAACCATCATCAGTCTCCAACAGCTCAAGGGTTTTCTTGGATTGAAGCAATTCACTACTAAAACTAATGTCGTCTCCGTTCTGAAAGCCGTCTTCAAGTTTAGACACCAGTGGAGATGGGAGAGTGCGCTATTAGGCATAATCTTCCTTTCTTTCCTCCTCTTCACAGTACAACTGAGGAAGAAGAAACCACAGCTATTTTGGGTGTCAGCAGTGGCTCCAATGGTGACAGTGGTAATCGGGTGCATCATTGCCTATTTCGCTGACGGGGATAAACATGGAATCCACACTGTTGGTCCTTTGAAGAAAGGATTGAATCCCATTTCCATCTACGATTTGAACTTCAACTCTGCCTATATAATGGCGCCCATAAAAGCGGGCTTGCTTACAGGCATCTTGGCTACAACCGAAGGGATAGCAATAGGAAGGAGCTTTGCCATGAAGAGAAATGAGCAAACTGATGGAAACAAAGAGATGATAGCCTTTGGTCTGATGAACCTTGTTGGATCTTTCACTTCTTGTTATTTGACTACTGGCCCATTTTCAAAAACTGCTGTCAATTTCAATGCCGGGGCTAGGACACCAATGGCCAATGTAGTGATGGCACTCTGTATGATGCTGATTCTCCTCTTCTTGGCTCCTGTCTTTCGTTACACCCCTCAGGTAGCTCTCTCTGCCATTATCACCGTAGCCATGCTTGGACTCATCAAGTACGACGAGGTTTATCATCTCTACAAGGTCGACAAGTTTGATTTCTGTATTTGCATGGCTGCATTTTTGGGAGTCATCTTCATTACCATGGATATGGGACTAATGATCTCAGTATGCCTTTCAATCGTCCGAGCACTTCTCTATGTGGCTAGGCCTGCTACTTGCAAGCTCGGGAACATTCCAAACTCAGCACTCTACCGCGACGTAGAGCAATATCCTGCTGCAAGCGGGGTCCCGGGCATCATAGTTCTTCAACTGGGTTCCCCAATTTACTTTGCAAATTGCATTTACCTTAAAGAAAGGATTATGAGGTGGGTTAGGGATGAACAAGGCAATCCGAACTCCAAAACAGCAGATATTGAGCATGTTTTACTAGATTTGGGAGGAGTTACCACTATTGACATGACAGGCATCGAAACCCTGGTTGAAATCCGAAGAAACATTTTAGCAAAAGGAATTAAGATGGGAATAATAAACCCCAGAATCAATGTGTTGGAGAAGATGATGCTTTCCAAATTCGTGGACCTCATAGGCAAGGAATCTATCTTCTTATCAGTTGAAGATGCAGTCAAGACATGTCAATTTTCACTCAATCAATCGCCTCAGAAGGGTGACTCTTAG 1914 0.4498 MENSRESEVTVNFSDRRNFATVLRSDLKETFFADDPFQEFRNEPPKRRTIKIFQYCVPMLEWLPKYNFQFFRYDFLAGITIASLAIPQGISYAKLAEIPPIIGLYSSFIPPFVYAVFGTSKYLAVGTIAASSLLIASTIKEKVSPDEDPTLYLNLVFTTAFCTGILQTILGVLRLGILVDFLSHSTITGFMGGTATIISLQQLKGFLGLKQFTTKTNVVSVLKAVFKFRHQWRWESALLGIIFLSFLLFTVQLRKKKPQLFWVSAVAPMVTVVIGCIIAYFADGDKHGIHTVGPLKKGLNPISIYDLNFNSAYIMAPIKAGLLTGILATTEGIAIGRSFAMKRNEQTDGNKEMIAFGLMNLVGSFTSCYLTTGPFSKTAVNFNAGARTPMANVVMALCMMLILLFLAPVFRYTPQVALSAIITVAMLGLIKYDEVYHLYKVDKFDFCICMAAFLGVIFITMDMGLMISVCLSIVRALLYVARPATCKLGNIPNSALYRDVEQYPAASGVPGIIVLQLGSPIYFANCIYLKERIMRWVRDEQGNPNSKTADIEHVLLDLGGVTTIDMTGIETLVEIRRNILAKGIKMGIINPRINVLEKMMLSKFVDLIGKESIFLSVEDAVKTCQFSLNQSPQKGDS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0402 637 ProSiteProfiles STAS domain profile. 502 624 IPR002645 -
Vvi11g0402 637 NCBIfam sulfate permease 58 620 IPR001902 GO:0016020|GO:0055085
Vvi11g0402 637 CDD STAS_SulP_like_sulfate_transporter 503 617 - -
Vvi11g0402 637 Pfam STAS domain 503 620 IPR002645 -
Vvi11g0402 637 FunFam Sulfate transporter 31 482 627 - -
Vvi11g0402 637 PANTHER SULFATE TRANSPORTER 21 627 IPR001902 GO:0016020|GO:0055085
Vvi11g0402 637 Gene3D STAS domain 482 627 IPR036513 -
Vvi11g0402 637 Pfam Sulfate permease family 71 452 IPR011547 GO:0016020
Vvi11g0402 637 SUPERFAMILY SpoIIaa-like 508 624 IPR036513 -
Vvi11g0402 637 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0402 Vvi-Chr11 3413268 3417761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0402 1 631 Inorganic Solute Cotransporters AT5G19600 63.950 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0402 K17471 - vvi:100252518 1246.88