Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0382 ATGGCTGATGTTGCTTTTGCTGCAGCAATTCGGAAAGTCGCTGACATACTTGGCAATCTTCTGGTTGATGAAGGCACTCGTTGGTATTGGTTGCAGGATGACATTAGGTGGATCCACACGGAGATGAGACGAATTCAATTGTTCCTAAAAGGTACTGAAGACATACAGGGCAACAGTGAAGGAGTGGCGAACTTGATAGAGGAGATCAGAGATCTGGGTTTTGATGTGGAAGACGTTATTGACACCTTCTTCCCTAAATTGGCATCACACAGAAATAAAAGGTCTCTGGGTTGCCTTTCAACTAAGGTTAGTTGCAACCCAATCTCCTTCACCTTTACTCGACATAAGTTTGGAATGGAGATCGCAAGAATCAAGAAATGGATTGAAGACATCAATCGTGCCCAGACAACTTATGGCAATACAGGTAACACCAGCAGAGAAGAAGAGCAGGACCTGAGGCAGACATTCCCTCATGTTGAGGTACCCAATATAATTGGTTTCGAAACACAAACTGAGAAATTGAGGGCCAAACTACTTGATGAGGATACACCATATTGTGTGATTTCAATTGTTGGTATGCCAGGTTTGGGTAAGACAACTCTTGCTAGGGAAGTTTTTAATTCTGTCAAACAAGGTTTTCAATGTTATGCTTGGGTTTACATTTCTCAAGAGCCTAGACTGAGAGATGTTCTGCAAGATATAGGGAGACAAGTGGGCTTGGCAAAGGAGATGCGAGAAGAAAGTCTGGAAGCTAACCTGTTCAAGTTTTTGAGGGAGAAGAGGTATGTATTAGTCCTTGATGACATATGGAAACCTGAAACATGGGATGCTCTTAAAAATGCCATTCCCTGCAATTCTAACCATGGCAGTAGATTAATCCTCACTTCCCGCGCTAGACATGTAGGTGTACACATAGGTGGGGAAAACTCTCTACACATCATGGAACCACTAGACTCAGGAAACAGCTGGGAACTCTTTTCTAACATAGTTATTATCTCGTTACAAAATATCAATGGAAGCTTTCGCTCTCCACAAATGGAAGATACGGGAAGACAAATTTTGGAAAAATGTGGTGGTGTCCCTCTGGCTATTATGGTCATGGGAAGCCACTTGTTGTGTGTAGAAAGGACACTACCTGCATGGAAGAGGTTCCTGGGAAGCATGGGCCATGGACGACCTGGAATTTCAAAAATCTTGGCTTTGAGTTACAAAGATTTATCCCACGAGTTAAAGCAATGTTTTCTCTATTTTGGTCTTTTCCCTGAAGACCATGAAATCCCTGCAACTAAATTGATTAATCTGTGGGTGGCTGAGGGATTTGTACAAACCCGAGGAGAGCAGACACCAGAGGATACAGGGGAGGATAATCTGCACGAGCTTATCAGTAGGAACTTGATTCAGGTTGTTAGGAGGAGGTTTGATGGAAGAGTTAGAACTTGTCGCATTCATGATCTATTGCGCAACCTTTGTATTTCCGAGGCCAACAAGAACTTCTTCTTCACAACACATGACAACATTGATTCTACTTATCCAAAGAGAGTACGTAGACTTACGACCTATCGCAGTAGCATCTGTGACTACATCTCTCTAGGCTGTCACACCCCCAGTCTTCGAGCTCTGCTATGTGTCAATAACAATGAGGAGATACTTCAAAACAAACAACTTGAATATATACAAAAAGGCTTGGGACTGCTTCGAGTGCTGAGTCTTGAGGGAGTAACATTCCCACCAACTCTTCCAGATGCAATAGGGAATCTTGTCCATTTGAGCTACCTTGAATTGGGGAGAGACGGTCTTGTGAGGCTCCCTTCCACCATAGGCAATCTCAAAAATTTAAAAACCTTGGATGCTAGACAATGCAATAATCTCGTCTTACCTACTGTTATGTGGAAGATGAAAGAGTTACGACACATTATCTTGACTCCCATAGCCACATTTGAATATCAATCGAAGTCTATAGGCCAGTTGCAACCAATTGAAGATGTATCTCTTCCAAATCTTCAAACTCTGCATATGATAAATGGCAACATCTTGAAAGCTGACTGCTTGCGCAAATTTACCAACTTGAGAAAATTGGGACTTGTTTGTGATGTTGCACAAGTTACTATAATACTATCAGATGCCATGACCATATCAGATAAGCTAGAGAAACTGACATTGACAGTTTTACCTTCCAAAAAAGGGAAAGAAACTAAGGTGGACCTTTTTAATGCAGATACTTATCCGCTACTCGATCTCCCTGCATGTCCAGCACTGAGTTTTTCTGCCTATCAGAATCTCAGTAGCCTTTATCTGGAGGGGGGATTTAAAAAGCTGTTAGATTTTCCCACAAGCCTCATCAAGCTCACTTTGTTGCAGATTCAATTGGAAGAAGACCCAATGGAGACACTGGGAAAGCTTCCCAACTTGAAGAAGCTTTACCTTGGTAGATTTTCGTACATGGGACTTAAGATGGTTATCTCAGGACCCGGTACCTTTCCTTCACTTGAAGACTTGATAATTGAGCTACTGCCTTTAAAAGAGTTGGAAGTGGATGAAGAAGTAATGCCGAAACTTAGGTATGTGAAAATAAAATTTGATGTTACACTAAAGATACACTCGTCGGTCCACTCAGATAGATTGAAAAGAATATTTTCCGAATTTAACGACTACCTCATGCGTATGAGTTTTTTGGAGCTGGACCTGGACCTGAAGCATTTTCCAGGCTGGCTGGATGATGATATCTTTTTCTTGGAGGAGGAAGATTTCATCTTGGAGCCAAGTAAGGATGCTAATAAAGGAAAAGAATTGATGCCTGATGAGGTTGCAAAGCAAGACACTGTTGAAGATCCAAATGGCATTTCTAAAAGGCCACTCGAATTGGGCCAATGCTCATCATCAGGAGGACAAAGTGAAAGTGAACAGAGAAAGAGTGGGGATGCTAATTAA 2928 0.4191 MADVAFAAAIRKVADILGNLLVDEGTRWYWLQDDIRWIHTEMRRIQLFLKGTEDIQGNSEGVANLIEEIRDLGFDVEDVIDTFFPKLASHRNKRSLGCLSTKVSCNPISFTFTRHKFGMEIARIKKWIEDINRAQTTYGNTGNTSREEEQDLRQTFPHVEVPNIIGFETQTEKLRAKLLDEDTPYCVISIVGMPGLGKTTLAREVFNSVKQGFQCYAWVYISQEPRLRDVLQDIGRQVGLAKEMREESLEANLFKFLREKRYVLVLDDIWKPETWDALKNAIPCNSNHGSRLILTSRARHVGVHIGGENSLHIMEPLDSGNSWELFSNIVIISLQNINGSFRSPQMEDTGRQILEKCGGVPLAIMVMGSHLLCVERTLPAWKRFLGSMGHGRPGISKILALSYKDLSHELKQCFLYFGLFPEDHEIPATKLINLWVAEGFVQTRGEQTPEDTGEDNLHELISRNLIQVVRRRFDGRVRTCRIHDLLRNLCISEANKNFFFTTHDNIDSTYPKRVRRLTTYRSSICDYISLGCHTPSLRALLCVNNNEEILQNKQLEYIQKGLGLLRVLSLEGVTFPPTLPDAIGNLVHLSYLELGRDGLVRLPSTIGNLKNLKTLDARQCNNLVLPTVMWKMKELRHIILTPIATFEYQSKSIGQLQPIEDVSLPNLQTLHMINGNILKADCLRKFTNLRKLGLVCDVAQVTIILSDAMTISDKLEKLTLTVLPSKKGKETKVDLFNADTYPLLDLPACPALSFSAYQNLSSLYLEGGFKKLLDFPTSLIKLTLLQIQLEEDPMETLGKLPNLKKLYLGRFSYMGLKMVISGPGTFPSLEDLIIELLPLKELEVDEEVMPKLRYVKIKFDVTLKIHSSVHSDRLKRIFSEFNDYLMRMSFLELDLDLKHFPGWLDDDIFFLEEEDFILEPSKDANKGKELMPDEVAKQDTVEDPNGISKRPLELGQCSSSGGQSESEQRKSGDAN* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0382 975 FunFam Probable disease resistance protein At1g61300 146 310 - -
Vvi11g0382 975 MobiDBLite consensus disorder prediction 922 975 - -
Vvi11g0382 975 FunFam Probable disease resistance protein At1g63360 403 492 - -
Vvi11g0382 975 Gene3D - 142 312 IPR027417 -
Vvi11g0382 975 SUPERFAMILY L domain-like 481 906 - -
Vvi11g0382 975 Gene3D Ribonuclease Inhibitor 492 889 IPR032675 -
Vvi11g0382 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 417 IPR027417 -
Vvi11g0382 975 CDD RX-CC_like 17 131 IPR038005 -
Vvi11g0382 975 MobiDBLite consensus disorder prediction 922 946 - -
Vvi11g0382 975 Gene3D - 8 122 - -
Vvi11g0382 975 Pfam Rx N-terminal domain 10 93 IPR041118 -
Vvi11g0382 975 Gene3D - 317 402 IPR042197 -
Vvi11g0382 975 Pfam NB-ARC domain 168 413 IPR002182 GO:0043531
Vvi11g0382 975 PANTHER DISEASE RESISTANCE PROTEIN RP 37 856 IPR044974 GO:0006952
Vvi11g0382 975 PRINTS Disease resistance protein signature 607 623 - -
Vvi11g0382 975 PRINTS Disease resistance protein signature 256 270 - -
Vvi11g0382 975 PRINTS Disease resistance protein signature 357 371 - -
Vvi11g0382 975 PRINTS Disease resistance protein signature 187 202 - -
Vvi11g0382 975 Gene3D - 403 491 IPR036388 -
Vvi11g0382 975 MobiDBLite consensus disorder prediction 952 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0382 Vvi-Chr11 3251962 3254889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0382 188 420 WRKY Transcription Factor Family AT5G45050 23.554 2.36e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0382 - - vvi:100262926 1931.38