Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0374 ATGGAGAACCGATTCAAACTACGAATCTCTCGCATGTTTCGCCGTTCATTCGGATCCTGTCGGCCCCGGAGCATGTCAGATGTTATCATATCGGACGTTATGGAAAAACCGGTGTTCGTAGCTCACAACCAACACCAGAGCTTCCAAATGATGGAAGTGTCATCTCCCAAACCTCGACCCTTTCCGTCTATGTGCAGACCCAGATGTCCAGAAAGATGTGAAATGATCGAACACAGCTGTATTGTGGCCGAGAAGGTGCTTCCAAGACGAAAAGTATCGGAGCGATGTTCGGTTTTCGGTTGTGGGGATGCTGAGGGACGTAAGTGTCCTCCTGCCTCACCTGCATCGCCTTTGAATGCGTTCTACAACGTTCAAGAATTTGGATCGAAAGAGAAGAGATCAAAGAAGAAGAAGAAGAAGAAGGCCCACGTGAAAAAGAACAAGATCAGAGAGATTAATTACATGTTCAGCTCATCTTCTGCAGACACCAATGGCGGTTTTGTCGGTGGTGGCTGGTTTAGCAGCGAAGACGAGAGAGAGGACGAAACAGAGACTCTATTCTCGTCAAAGAGTCTCTCCTCGGATTCATCCGAGTCCCAGAAACGCCGGTCTCTCCGCAGAAACCAGCGGAGCCGGCGTAGAAGAGGTGCAATAAACAAGGGTTCTTGTCATCAGGAAACTAACGTACTGCCATTGGAAGGGAAAGTGAAAGACAGCTTTGCAGTGGTGAAGAGGTCCAGTGATCCGTACAGTGATTTCAGGACATCAATGGTGGAAATGATTGTGGAGAAACAGATATTTGCAGCTAAAGATCTGGAGCAACTGTTGCAGTGCTTTCTGTCTTTGAACTCTTCTCATCATCATAGGATCATCATTGAAGTTTTCACAGAGATTTGGGAAGCTCTCTTCTCTAACTGGTCTTAA 924 0.4697 MENRFKLRISRMFRRSFGSCRPRSMSDVIISDVMEKPVFVAHNQHQSFQMMEVSSPKPRPFPSMCRPRCPERCEMIEHSCIVAEKVLPRRKVSERCSVFGCGDAEGRKCPPASPASPLNAFYNVQEFGSKEKRSKKKKKKKAHVKKNKIREINYMFSSSSADTNGGFVGGGWFSSEDEREDETETLFSSKSLSSDSSESQKRRSLRRNQRSRRRRGAINKGSCHQETNVLPLEGKVKDSFAVVKRSSDPYSDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSSHHHRIIIEVFTEIWEALFSNWS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0374 307 ProSiteProfiles OVATE domain profile. 242 301 IPR006458 -
Vvi11g0374 307 NCBIfam uncharacterized plant-specific domain TIGR01568 240 303 IPR006458 -
Vvi11g0374 307 MobiDBLite consensus disorder prediction 184 224 - -
Vvi11g0374 307 Pfam Transcriptional repressor, ovate 246 303 IPR006458 -
Vvi11g0374 307 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 113 304 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0374 Vvi-Chr11 3196862 3197785 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vvi11g0374 Ovate 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0374 - - vvi:100266339 570.852