Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0357 ATGCCTCAAGACAGTCGAAGATCAGTTGGCTACAGATCATTTGTCACATGTGATGATCCGAAAGGTGTTGTTGAATGTGGGACAATCAGAAAATCCAAGAATGATTCAAAAAAATTGAAGCATAAGATTGAAAGTCGAGGAACGCCCAAGAAATCGATTACATCTTTGATTTGCAAGGAAGAGAGAAGGGAGATGGAATCTAAAGGGACCACAGAAGGATTACATAATCCATCTACGTTTCAACTCTTGGAGGTGTCTAGAGGAGCTCAGAAGCTGAACAAAATGATTGATTCATGGTCTCAGGGGCCAAGCATTGATGAGCAGTCCAACGATATTGCTAAAGATTTGCTGAAAGGAGCTCTTGACTTGCAGGAGTCTCTAATCATGCTCGGCAAGTTACAGGAGGCGTCACGGTATATGGCTCAGTTGAAGAAAAAGCAGAAGGAGAAGTCAGAAAGAGGAAGAAATGAAGAATTGGGGTCTGAAAGAATGGACTCCAATCGATTTGGAGACTGCAATTACCATATGGGATTTCAAAAGCCAAGGCTTTCTGTTGATGGGTCTTCAAGGAATTCTACTGAGGAACTTAAGAGAGTGATTAGAGACAGCTTCGCCAGGCAGAATCTCACGCAGAGCATAGCTGCTCAAGAAAAGTCTTGTTTTAACCGAAGAAAATTAGACTCAGCTTTGGAATTCCCATCAGCAAGCTCGAGCCAATCTTCATTGGTTCACTCTGATGACACTCCTTTTGCTGACTCGCTTTCACCAGTGGATTCCTCGAAGAAGACAAAAGGGCCGAATTTGATTGCCAAGCTTATGGGTCTAGAAGAATTCCCCTCAGAACAATTCCAGACCATTTCCCAAAAGCATTCGGAGGGTGGGAAGACACCGAATCAGAAGAGACCTCTCTTTGATATTGATATGCCAAAGGTGAGGAAGCCTCAGTCTGCTGTCCAGAAGGTGGATTTGGAGCGGAGGACGCTGAAGGAAATACTTGAGACCATGCAATTTAAAGGACTTCTGAAATGCAATTCTGCTAAAGGCCTTGAGCCTAAGGCCCTGCATTCCAGGACTTCCCATTCCAAAGAAAGGTTGATTGATGATATGCCACCTATTGTACTTATAAAACCTCTTCCTTTTCCATGTCTAGAATCAAAGCAGCTCCTTGCACCAAATTGCATTCGGGAGGCAGCTTTAGACACTAAGAAGATTCTCAGAAAACTGAAGCAAAAGGAAGAGGTTCCACTGAAGACAATTCACTGTGAAGAAGGGATTTTGAATTCCACTAAGATGTCTAGGAAACTGGAAGCTGAAAAGAAGCCGGTCAAAAGGATAAGTGAGGAAGGTGATAGGTACTGTAAAGAGTTAGTTCGGAAATCAGAAGAAAAAGAAGCCAAGACTAAGGAGAAAGCTTCAAACGAGATGAAAGCTGGAGTTTCTGTGAATCAAAAAGCACAGAAAAAGGAGATGATTGACAAGAAAGCTGACAACATTCAAAAGGCGACACCCACAAACAGGAGGAGGAAAACTACAGAGGAGAGCGTGAAATCCAACAATGTGTCAAAATCTCAAGATCAAGCAGAGGTAACTTCTAAAATGCTCAGAAAGCCTGAAATTGGAACAAACATCTCAAAGAATCAGACTTCCCGACGACATAGTAAAGCCACAAATGCCATCACAGAAGACACAACACAATCCATATTGCATGACTCAGCCAGTCAAAAGATTCAGACAAAGAAGGAAAAGCCAGTCAGGGAGAGACGGGCAGCTAATTTAGTTAAGGAGGATTTAGGATGCCAAGCTGATGACAAGAGGATTGATCTGACATGTGAAAACAACTCTGTTGTGGAAAGAATCGACACTACGCTTGCAGATCAATTCCCTTTGAAGGAGGAAACAGACACCTCTGGACTTCAAATTGAAGAATACCGCAGCAACGATCCATGTTCACTGCAGGAAGTTACAATGCTGAGCCCCCAACATGAAAAGAGTGTCAAACCTGCCGAAGATGTTTCTGATCATATTGTTCCCAGTAGAATGAAGAGGAAAAGCTCTAAAGCCATTACCAATCTGAAAGCTTTGCTCTCAAGCAATTCATCATTCCTCAGTCGTGCTGATGAGATATTTGATCTCAATGTGACTCAACCAACTCCTTTGCAAACAATGGGCATCAATGATTTTGGACTAGCTAATCCGCGACTCTCTTTAGACTGTGCACATGAACTCATGGAACTCAAAAGCCTTCAAGATTCTCAAACAGCACATCCTCTGTGGCAAACCAGCTTAGGGAATTCAATAGCCTGCATCTCTCTGGACCAGTTGGTGGATGAAGTCTGTGATGGGGTTGAGCATCTCACCAGCTATAGTAAGCTTGCTGGTGAGAATCTTCCTACAGATACCATCTACGCAATGCTGCATTGTGATCTAAAGTTCAAGGGACCGATAACTGGTATATGGGATTTGGGGTGGAGGAATGGCTTTTCTATAGATGAAGTTGAGCAAGTTGTGGTTGATATACAGAAGTTAGTTTTAAGCAGGTTGATCGAGGATATACTTGTAGATTTTGCGCTTTAG 2574 0.4277 MPQDSRRSVGYRSFVTCDDPKGVVECGTIRKSKNDSKKLKHKIESRGTPKKSITSLICKEERREMESKGTTEGLHNPSTFQLLEVSRGAQKLNKMIDSWSQGPSIDEQSNDIAKDLLKGALDLQESLIMLGKLQEASRYMAQLKKKQKEKSERGRNEELGSERMDSNRFGDCNYHMGFQKPRLSVDGSSRNSTEELKRVIRDSFARQNLTQSIAAQEKSCFNRRKLDSALEFPSASSSQSSLVHSDDTPFADSLSPVDSSKKTKGPNLIAKLMGLEEFPSEQFQTISQKHSEGGKTPNQKRPLFDIDMPKVRKPQSAVQKVDLERRTLKEILETMQFKGLLKCNSAKGLEPKALHSRTSHSKERLIDDMPPIVLIKPLPFPCLESKQLLAPNCIREAALDTKKILRKLKQKEEVPLKTIHCEEGILNSTKMSRKLEAEKKPVKRISEEGDRYCKELVRKSEEKEAKTKEKASNEMKAGVSVNQKAQKKEMIDKKADNIQKATPTNRRRKTTEESVKSNNVSKSQDQAEVTSKMLRKPEIGTNISKNQTSRRHSKATNAITEDTTQSILHDSASQKIQTKKEKPVRERRAANLVKEDLGCQADDKRIDLTCENNSVVERIDTTLADQFPLKEETDTSGLQIEEYRSNDPCSLQEVTMLSPQHEKSVKPAEDVSDHIVPSRMKRKSSKAITNLKALLSSNSSFLSRADEIFDLNVTQPTPLQTMGINDFGLANPRLSLDCAHELMELKSLQDSQTAHPLWQTSLGNSIACISLDQLVDEVCDGVEHLTSYSKLAGENLPTDTIYAMLHCDLKFKGPITGIWDLGWRNGFSIDEVEQVVVDIQKLVLSRLIEDILVDFAL* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0357 857 MobiDBLite consensus disorder prediction 516 530 - -
Vvi11g0357 857 Coils Coil 133 153 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 459 473 - -
Vvi11g0357 857 PANTHER OS01G0228800 PROTEIN-RELATED 1 855 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 142 169 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 142 171 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 459 587 - -
Vvi11g0357 857 Pfam DUF761-associated sequence motif 258 283 IPR032795 -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 234 264 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 284 303 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 540 573 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 234 262 - -
Vvi11g0357 857 MobiDBLite consensus disorder prediction 486 515 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0357 690 852 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 38.462 4.35e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0357 - - vvi:100250746 1645.94