Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g0325 | ATGGGGTGTGTTTATTCGAGGTCATGTATTGGGGAGGTTTGTACTCCAAGACATGCAAGAGTTAAAGAAACTGAAAATGCGAGAGCAGGTGCAGAGCTTCCCGTGTTCTCTCCTGCTTCTTCAGATGGGGAAGATGGGGAAATTAGAGATCAGTTGAATCAGTTGAGTTTAACTAGGGATTCTGAAGTAGGCATCACTAGGCTTTCTAGGGTTTCTTCTCAGTTTCTACCCCATGATGGGTCACGAACTGTTAAAATTCCATCGGGAAACTATGAATTACGATTTTCGTTTCTGTCACAGAGAGGATATTATCCTGATGCTCTTGATAAAGCTAACCAAGACAGTTTTTGTATCCACACCCCTTTAGGGACAAACCCTGACGATCATTTTTTTGGGGTTTTTGATGGGCATGGAGAATTCGGTGCTCAGTGCTCACAGTTTGTGAAGCAAAAATTATGTGAAAATTTGCTTAGGAATAGTAGGTTCCATATGGATGCAATTGAGGCATGCCATGCCGCATTCTTGACGACAAATTCACAGTTACATGCTGATAGTTTGGATGATAGCATGAGCGGCACAACTGCAATAACAGTATTGGTTCGTGGTCGGACTATATATGTTGCTAACTCAGGGGATTCCAGAGCTGTTATAGCAGAAAGAAAAGGGAAAGAAATTGTGGCTGTTGATTTATCAATTGATCAAACACCATTTCGGGCTGATGAACTTGAAAGAGTTAAGCTTTGTGGAGCGAGGGTCCTCACTTTGGATCAGATAGAAGGGCTGAAGAACCCAGATGTGCAGTGTTGGGGCACTGAAGAGGGGGATGATGGCGATCCTCCTAGACTATGGGTACCCAATGGGATGTATCCTGGCACGGCTTTTACCCGAAGTATTGGCGATTCAATTGCTGAGTCAATTGGGGTGGTTGCTAACCCTGAAATTGTTGTTCTGGAGCTCACACCAGATCATCCTTTCTTTGTGCTAGCTAGCGATGGGGTGTTTGAGTTCCTTTCCAGCCAAACTGTTGTTGACATGGTTACAAAGTTTAAGGATCCCCGTGATGCTTGTGCTGCAATTGTTGCTGAATCTTATCGGCTTTGGCTACAGTATGAAACTCGCACAGATGACATTACTGTGATAGTTGTGCATATTAATGGGCTAACTGATCCTGATGTTGGACAATCAGCAAATCCTGGTGCTATTTCAAGACCTCCTGTTCCACAAGTCGTGGAAGTAACAGGATCTGAATCTCCTTCAACCTTGAGCTGGAATTCTAGGAATCATCGGGTAAGGCATGATTTATCACGGGCACGTCTTCGTGCCATTGAAAGTTCTCTGGAGAATGGTCAAATTTGGGTTCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAGGCACACATTGAGCGGGCATTGCATGACCATTTCCTATTCAGGAAGCTTACTGACTCTCAGTGCCATGTCTTGTTGGATTGCATGCAACGAGTTGAAGTTCAATCAGGGGATGTTGTAGTGAAACAGGGTGGTGAAGGTGACTGCTTTTATGTTGTTGGCAGTGGAGAATTTGAGGTCTTGGCAACCCAGGAAGAAAAAAATGGCGAGGTGACTAGGGTTCTGCAACAGTATACAGCTGAAAAGTTATCATCCTTTGGCGAGCTGGCACTCATGTATAACAAACCGCTACAGGCATCTGTTCGTGCTGTGACAAATGGAACTCTTTGGGCTTTGAAAAGAGAAGATTTTCGAGGAATTTTGATGTCTGAATTTTCAAATTTGTCATCCTTGAAGTTGCTTCGGTCAGTAGATCTTCTTTCAAGGTTGACAATCTTACAGTTGAGCCACATTGCAGATTCTCTTTCTGAAGTGTCCTTCTCTGATGGGCAAACTATAGTTGACAAAAATGAGGGTCCTGTTGCTTTGTATATCATCCAAAAGGGACAAGTGAGAATCACTTTTGATCCAGACTCAATAAGGAGTCCAAGCTTCGGGAGCCTTGTATCTGACAATCAAAAGCAGGATGATGATACAGAAAGCAGTACAGAGTTTGTAGTGAAGACTGAGGGAAGCTATTTTGGTGAATGGGCACTTCTTGGTGAAAATATTGGCTCTTTTAGTGCAGTTGCTATGGGTGATGTGGTGTGTGCTGTTTTAACAAAGGAAAAGTTTGATGCTGTTGTTGGTCCATTGGCAAAGCTGTCACAGGGTGATGAAAAGTCAAGAGACCATTCAAGAGACTATTCTTCAAGCCTCCCTAAGGAATCTGTCAAAAATATTGATCCTTCAACTCTTACGAAAGTTCAGCCTTCTGACTTGGAGTGGAGAACCTGTTTATATTCCACTGACTGCAGTGAGATTGGGCTTGTATTGTTGAGAGATTCAGAAAATTTGCTAAGCTTGAAAAGGTTTTCAAAGCAGAAGATCAAAAGGCTTGGGAAGGAAGCACAGGTCTTAAAGGAGAAGAATCTAATGATGAGTATGGCTCCTTCAGCTTGTGTGCCACAGGTTCTATGCACTATTGCTGACCAGAACCATGCCAGTATCCTGCTGAATACATGTCTTGCCTGCCCATTTGCTTCGATACTTCACACTCCACTAGATGAACCATCTGCACGGTTCTGTGCTGCCTCTGTTGTTATTGCCTTGGAAAATTTACACAAGAATGGTATTCTCTACAGAGGTGTGTCTCCTGATGTTCTAATGTTTGATCACACAGGACATTTGCAGCTTGTAGACTTCAGATTTGGGAAGAAGTTGGCTGATGAAAGAACATTTACAATATGTGGGATGGCAGACTCTTTAGCACCAGAGATAGTCCAAGGAAAAGGACATGGCTTTCCTGCTGACTGGTGGGCACTGGGAGTCTTGATCTATTTTATGCTACAAGGTGAAATGCCATTTGGATCATGGAGAGAAAGTGAGCTTGATACATTTGCAAAGATTGCTAGGGGACAGCTAAACCTTCCGTGCACCTTCAGTCCTGAAGCTGTTGATCTCATAACAAAGTTACTTGAAGTTGATGAAAGCACAAGACTTGGAAGCCAAAATCCAGATTCTGTCAAAAGCCATAAGTGGTTTGATGGGATTGATTGGAAGAGACTGACAGATTCTAGCTTTCCTGTTCCACATGAGATCACATCTCGAATAGCTCAACATCTGGAAAATCACACAGAGGACTATACCATTCATTCACTTTCCCCATCTCGAGACCCAGAAGAACTTAATACTCCAGAATGGCTTGAAGAGTGGTAG | 3252 | 0.433 | MGCVYSRSCIGEVCTPRHARVKETENARAGAELPVFSPASSDGEDGEIRDQLNQLSLTRDSEVGITRLSRVSSQFLPHDGSRTVKIPSGNYELRFSFLSQRGYYPDALDKANQDSFCIHTPLGTNPDDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRNSRFHMDAIEACHAAFLTTNSQLHADSLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERKGKEIVAVDLSIDQTPFRADELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAESIGVVANPEIVVLELTPDHPFFVLASDGVFEFLSSQTVVDMVTKFKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTDPDVGQSANPGAISRPPVPQVVEVTGSESPSTLSWNSRNHRVRHDLSRARLRAIESSLENGQIWVPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQSGDVVVKQGGEGDCFYVVGSGEFEVLATQEEKNGEVTRVLQQYTAEKLSSFGELALMYNKPLQASVRAVTNGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHIADSLSEVSFSDGQTIVDKNEGPVALYIIQKGQVRITFDPDSIRSPSFGSLVSDNQKQDDDTESSTEFVVKTEGSYFGEWALLGENIGSFSAVAMGDVVCAVLTKEKFDAVVGPLAKLSQGDEKSRDHSRDYSSSLPKESVKNIDPSTLTKVQPSDLEWRTCLYSTDCSEIGLVLLRDSENLLSLKRFSKQKIKRLGKEAQVLKEKNLMMSMAPSACVPQVLCTIADQNHASILLNTCLACPFASILHTPLDEPSARFCAASVVIALENLHKNGILYRGVSPDVLMFDHTGHLQLVDFRFGKKLADERTFTICGMADSLAPEIVQGKGHGFPADWWALGVLIYFMLQGEMPFGSWRESELDTFAKIARGQLNLPCTFSPEAVDLITKLLEVDESTRLGSQNPDSVKSHKWFDGIDWKRLTDSSFPVPHEITSRIAQHLENHTEDYTIHSLSPSRDPEELNTPEWLEEW* | 1084 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g0325 | 1083 | Coils | Coil | 801 | 821 | - | - | |
Vvi11g0325 | 1083 | SMART | PP2C_4 | 94 | 382 | IPR001932 | - | |
Vvi11g0325 | 1083 | SUPERFAMILY | cAMP-binding domain-like | 458 | 588 | IPR018490 | - | |
Vvi11g0325 | 1083 | Gene3D | Jelly Rolls | 453 | 592 | IPR014710 | - | |
Vvi11g0325 | 1083 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 478 | 587 | IPR000595 | - | |
Vvi11g0325 | 1083 | Pfam | Protein phosphatase 2C | 123 | 363 | IPR001932 | - | |
Vvi11g0325 | 1083 | FunFam | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 452 | 592 | - | - | |
Vvi11g0325 | 1083 | Gene3D | Phosphorylase Kinase; domain 1 | 779 | 856 | - | - | |
Vvi11g0325 | 1083 | PRINTS | cAMP-dependent protein kinase signature | 499 | 513 | - | - | |
Vvi11g0325 | 1083 | PRINTS | cAMP-dependent protein kinase signature | 514 | 528 | - | - | |
Vvi11g0325 | 1083 | PRINTS | cAMP-dependent protein kinase signature | 549 | 558 | - | - | |
Vvi11g0325 | 1083 | PRINTS | cAMP-dependent protein kinase signature | 723 | 735 | - | - | |
Vvi11g0325 | 1083 | MobiDBLite | consensus disorder prediction | 735 | 750 | - | - | |
Vvi11g0325 | 1083 | CDD | PP2Cc | 110 | 384 | IPR001932 | - | |
Vvi11g0325 | 1083 | ProSiteProfiles | Protein kinase domain profile. | 753 | 1026 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0325 | 1083 | MobiDBLite | consensus disorder prediction | 734 | 755 | - | - | |
Vvi11g0325 | 1083 | FunFam | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 594 | 743 | - | - | |
Vvi11g0325 | 1083 | Coils | Coil | 526 | 546 | - | - | |
Vvi11g0325 | 1083 | SUPERFAMILY | PP2C-like | 82 | 386 | IPR036457 | - | |
Vvi11g0325 | 1083 | CDD | CAP_ED | 478 | 587 | IPR000595 | - | |
Vvi11g0325 | 1083 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 604 | 729 | IPR000595 | - | |
Vvi11g0325 | 1083 | PANTHER | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE | 466 | 1043 | - | - | |
Vvi11g0325 | 1083 | FunFam | Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 89 | 386 | - | - | |
Vvi11g0325 | 1083 | ProSiteProfiles | PPM-type phosphatase domain profile. | 94 | 384 | IPR001932 | - | |
Vvi11g0325 | 1083 | Pfam | Cyclic nucleotide-binding domain | 497 | 588 | IPR000595 | - | |
Vvi11g0325 | 1083 | Pfam | Cyclic nucleotide-binding domain | 623 | 726 | IPR000595 | - | |
Vvi11g0325 | 1083 | SMART | cnmp_10 | 478 | 602 | IPR000595 | - | |
Vvi11g0325 | 1083 | SMART | cnmp_10 | 604 | 742 | IPR000595 | - | |
Vvi11g0325 | 1083 | Pfam | Protein kinase domain | 789 | 1026 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0325 | 1083 | SUPERFAMILY | Protein kinase-like (PK-like) | 759 | 1066 | IPR011009 | - | |
Vvi11g0325 | 1083 | Gene3D | Transferase(Phosphotransferase) domain 1 | 857 | 1044 | - | - | |
Vvi11g0325 | 1083 | Gene3D | - | 89 | 385 | IPR036457 | - | |
Vvi11g0325 | 1083 | Gene3D | Jelly Rolls | 593 | 742 | IPR014710 | - | |
Vvi11g0325 | 1083 | SMART | serkin_6 | 780 | 1026 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0325 | 1083 | SUPERFAMILY | cAMP-binding domain-like | 596 | 729 | IPR018490 | - | |
Vvi11g0325 | 1083 | MobiDBLite | consensus disorder prediction | 1060 | 1083 | - | - | |
Vvi11g0325 | 1083 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169 | |
Vvi11g0325 | 1083 | CDD | CAP_ED | 604 | 735 | IPR000595 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi11g0325 | Vvi-Chr11 | 2787458 | 2800657 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi11g0325 | 1 | 1083 | PP2C-type Phosphatase Gene Family | AT2G20050 | 70.417 | 0.0 | 1544 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_PKA-PKG | Vvi11g0325 | Pkinase | 4.9e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g0325 | - | - | vvi:100266345 | 2180.22 |