Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0284 ATGGGGAACAAGATCGCGCGAACGACGCAGGCGTCGGCCTCCGAGTACTACCTCCACGACCTCCCTTCCTCCTACAATTTAGTGCTCAAGGAGGTGCTAGGGCGAGGCCGCTTTTTCAAATCCATTCAGTGCAAGCACGATGAGGGATTGGTCCTCGTCAAGGTCTATTTCAAGCGTGGCGACTCTATCGATCTCAGGGAATACGAGCGTCGCCTCTTCCAAATCCAGGGGATCTTCCGCGCCCTTGACCACCCCCATGTCTGGCCTTTTCAGTTTTGGATTGAAACTGATAAAGCAGCTTATCTTTTGAGGCAATACTTCTTCAATAATCTTCATGATCGGTTGAGTACTCGACCTTTTCTCAGTCTCATTGAGAAGAAATGGTTGGCTTTTCAGTTACTCTGTGCAGTGAAACAGAGTCATGAGAATGGGGTTTGTCATGGTGATATTAAGTGTGAGAATGTGCTGGTTACGTCATGGAATTGGCTTTACCTTGCTGACTTTGCCTCATTTAAACCCACTTACATACCTGATGATGACCCATCGGATTTCTCATTTTTCTTTGATACTGGAGGAAGAAGGCTTTGTTATCTCGCACCTGAGCGATTTTATGAGCCTGGAGGTGAGATGCAAGTAGCTCAAGGTGCACCTTTAAGGCCTTCTATGGACATATTTGCTGTAGGGTGTGTGGTTGCAGAACTTTTCCTTGAGGGTCAGCCATTGTTTGAACTATCCCAGCTACTGGCTTATCGCAGAGGGCAGTATGATCCTAGCCAACATCTGGAGAAGATCCCAGATTCTGGAATTCGCAAGATGATTCTTCATATGATTCAGCTGGACCCAGAGTCACGTTTTTCTGCTGAAAGCTATCTACAGAACTATGCATCCATTTTGTTCCCAAGCTACTTCTCACCATTTCTACACAATTTTTATTCCTGCTTGAATCCTCTTGATTCAGATACGAGGGTTGCAGTCTGCCAGAGTCTTTTCCATGAGATACACAAGCAAATGATGAGCAATGCATCAGCTGAGGTCACAAGTGCTGAGCTGAGCACACCTTTAAATGCCACAGGCTGCAAACCATCAAAACAGGTGGTTGCAAAACAAAAATTGAACTTGACAAAGAACTCCTCGAGAAAACAAGAGAATGAGAAAGGCTTAATTCATAACCAGTTTGAACTCCTTGGTGATATCAATAGCCTACTCAAAGATGTAAAACAAAGTAATAATTATTCTGGTGTGAAGTCAGTAGTGGAGGATGCACCTAATTCTTCACACCAAAACTCTGGCAAAGATTCTCCTGGCAGGCTAGTTGAAACCATCTCCAATGTATTCAAGAAAAATGATTATCCCCTTCTCAAGAAGATTACAATGGATGATTTGAATACATTGATGTCTGAGTATGATAGCCAGTCAGATACTTTTGGCATGCCTTTCTTACCACTACCTCAGGATTGTATGAGCTGTGAAGGTATGGTTCTTATTGCCTCACTGCTCTGTTCCTGTATACGCAACGTCAAGTTGCCTCATTTGAGGAGGGGTGCGATACTTCTACTTAAATCTTGTTCCCTATATATTGATGATGAAGATCGCTTGCAGCGTGTGCTTCCTTATGTTATTGCAATGCTTTCTGATCCAGTAGCAATTGTGCGCTGTGCTGCCCTGGAGACTCTTTGTGACATTCTCCCTCTAGTTCGAGATTTTCCTCCTAGTGATGCTAAAATTTTTCCTGAATACATTCTTCCTATGCTTTCCATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCTAGAAGTATATCTAGGCTGGCATTAACTGCTTATGGATTCTTGATCCACTCATTAAGCTTGAGCGAGGCAGGGGTGCTTGACGAATTGAATTCACAGCAGAAATCATTGGCACCATCCACTGAGACTTCTGGAAGGCTGCAGAAGACACAGCTTGCACAGTTGAGGAAGTCCATAGCCGAGGTTGTTCAAGAACTTGTAATGGGCCCAAAGCAAACGCCAAATATCAGGAGAGCCCTCCTGCAGGACATTGGCAACTTATGCTGCTTCTTTGGCCAGAGACAAAGTAATGACTTTCTGTTACCCATCCTTCCTGCTTTTCTAAATGACAGAGATGAGCAGCTAAGGGCAGTTTTCTATGGCCAGATTGTGTATGTTTGCTTCTTTGTGGGCCAAAGAAGTGTAGAGGAATACCTTTTACCTTATATTGAGCAGGCTCTAAGTGATGCAACGGAAGCTGTCATTGTCAATGCATTGGATTGCTTGGCTGTTCTGTGCAAAAGTGGTTTCTTGCGGAAGAGGATACTACTGGAGATGATAGCGCATGCCTTTCCATTGTTATGTTATCCTAGTCAATGGGTAAGAAGGTCAGCTGTCACCTTCATTGCTGCTAGTAGTGAAAACTTAGGTGCTGTGGATTCATATGTTTTCCTTGCTCCAGTGATACGCCCTTTCCTCCGCAGGCAACCAGCATCTCTGGCTTCAGAGAAGGCTCTTCTTTCATGTCTTAAGCCCCCTGTCTCAAGACAGGTATTTTATGAAGTTTTAGAGAATGCCAGGAGCTCAGATATGTTGGAGAGACAGAGAAAGATATGGTACAATTCATCGGTACAACCTAAACAATGGGAAACTGTTGATTTACACAGGAGAGGGGCAGAGGAATTAAATTTAATGAAAAGCTTGCCTGATGGACAACGAGCTCTCGAGGCTCAAAACCCTGTTGGCAATGCAGCACAACAGCTGGAGCTGACTCAATCCAACAATAGTGAGGCTAGGTGGAGAGCAGTGGGAAGTTTTATGCGCAATGATTCTAGCACTGTTGACATCTCTGATCCTCTGTGCTCAGATAAGCTACAATTCTCCGGTTTTATGACTCCACAGATTGGGGGTGTGAACAGCTTCATTTGTGATAAATCATCTGAAGGCATACCTTTATACTCCTTTAGCATGGACAAACGGGCAGCTGGGGTTCCTCCGGCAGCATCCGATTCATCATTACAGTTGAACTCCCTAGGAACTGGTTCACCATCCTTGACTTGGATGGACCCAGTAAGTAAATCATTTAACTTGGCTAATTCATTTCCTGCACCAAAGCTTGTTTCAGGGTCATTCAGCTTCAGTAATGGTTCTAAACAGTTCTACAGAGTGGTACATGAACCGGAAAGCAGGGAAAATGACCAAACAGCCTATGTCAACAGCAAGTTTCAAGATATGGGAATATCTGGAACATCGAAAGGAAGTTCTATTACGGTTGAGGATTCTTCCTCTTCAACTGATATAACAGGATTGCCATCTTTTGCACGAACATCATCGATTCCAGATATGGGGTGGAGGCCACGCGGGGTTTTGGTTGCCCACCTACAGGAGCATCGTTCTGCTGTCAATGACATTGCCATTTCAACTGACCACAGTTTTTTTGTGAGTGCATCTGATGACTCCACTGTCAAGGTGTGGGATTCAAGAAAATTGGAAAAGGACATCTCATTTAGGTCAAGGCTAACTTATCCTCTAGAGGGAAGCCGAGCACTGTGTACTGCAATGCTCCGGAATTCTGCTCAAGTCATTGTTGGAGCATGTGATGGCATCATACATATGTTCTCTGTTGATTACATTTCCAGAGGACTTGGAAATGTTGTTGAGAAATATTCAGGTATTGCTGATATTAAAAAGAAGGACGTTGGGGAGGGGGCCATCCTCAGCCTTTTGAACTACTGTGCTGATGGCTCTCCTAGTCAAATGGTTATGTACAGCACCCAAAATTGTGGTATCCATTTGTGGGATACAAGGACAAATTCAAATGCGTGGACATTGAAAGCAATTCCTGAGGAAGGTTATGTGTCTTCTCTGGTAACTGGTCCATGTGGGAATTGGTTTGTATCAGGGTCTTCAAGGGGTGTGCTTACACTTTGGGATCTGAGGTTCCTGGTACCTGTTAACTCCTGGCAGTATTCTCTTGTATGCCCCATAGAGGAAATATGCCTTTTTGTTCCTCCTCCAAATGCTTCTGTATCTACTATGGCAAGACCTCTAATTTATGTCGCTGCGGGTTGCAATGAAGTATCTCTTTGGAATGCTGAGAACGGTAGCTGCCACCAGGTACTAAGGGTAGCAAATAATGAAAGTGATGCTGAAATGTCTGACCTACCTTGGGCCTTGGCCAGACCATCCAGTAAGTCAAATTCTAAACCAGATATAAGACGGAATGTCAATCCTAAGTACAGAGTTGATGAGCTGAATGAACCTGCTTCCCGTCTTCCTGGCATCCGATCTTTGCTTCCATTACCTGGGGGTGATTTGTTAACTGGGGGTACTGACTTGAAGATACGTCGATGGGACCATTACAGCCCTGACCGAAGTTACTGTATTTGTGGACCAACCATAAAGGGAGTTGGAAATGATGATTTCTTTGAAACGAAATCTAGTTTTGGGGTGCAAGTGGTGCAGGAGACAAAGAGACGTCCTCTTGCAACTAAGTTGACATCAAAGGCAGTTCTTGCAGCTGCGGCCACTGATTCTGCTGGTTGTCACCGTGACTCTGTCCTCTCATTGGCATCTGTCAAGTTGAATCAGAGACTCTTGATATCAAGCAGTAGAGATGGGGCTATCAAGGTTTGGAAGTAG 4638 0.4439 MGNKIARTTQASASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSIDLREYERRLFQIQGIFRALDHPHVWPFQFWIETDKAAYLLRQYFFNNLHDRLSTRPFLSLIEKKWLAFQLLCAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDDPSDFSFFFDTGGRRLCYLAPERFYEPGGEMQVAQGAPLRPSMDIFAVGCVVAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLDPESRFSAESYLQNYASILFPSYFSPFLHNFYSCLNPLDSDTRVAVCQSLFHEIHKQMMSNASAEVTSAELSTPLNATGCKPSKQVVAKQKLNLTKNSSRKQENEKGLIHNQFELLGDINSLLKDVKQSNNYSGVKSVVEDAPNSSHQNSGKDSPGRLVETISNVFKKNDYPLLKKITMDDLNTLMSEYDSQSDTFGMPFLPLPQDCMSCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSCSLYIDDEDRLQRVLPYVIAMLSDPVAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYARSISRLALTAYGFLIHSLSLSEAGVLDELNSQQKSLAPSTETSGRLQKTQLAQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGQRSVEEYLLPYIEQALSDATEAVIVNALDCLAVLCKSGFLRKRILLEMIAHAFPLLCYPSQWVRRSAVTFIAASSENLGAVDSYVFLAPVIRPFLRRQPASLASEKALLSCLKPPVSRQVFYEVLENARSSDMLERQRKIWYNSSVQPKQWETVDLHRRGAEELNLMKSLPDGQRALEAQNPVGNAAQQLELTQSNNSEARWRAVGSFMRNDSSTVDISDPLCSDKLQFSGFMTPQIGGVNSFICDKSSEGIPLYSFSMDKRAAGVPPAASDSSLQLNSLGTGSPSLTWMDPVSKSFNLANSFPAPKLVSGSFSFSNGSKQFYRVVHEPESRENDQTAYVNSKFQDMGISGTSKGSSITVEDSSSSTDITGLPSFARTSSIPDMGWRPRGVLVAHLQEHRSAVNDIAISTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYPLEGSRALCTAMLRNSAQVIVGACDGIIHMFSVDYISRGLGNVVEKYSGIADIKKKDVGEGAILSLLNYCADGSPSQMVMYSTQNCGIHLWDTRTNSNAWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSLVCPIEEICLFVPPPNASVSTMARPLIYVAAGCNEVSLWNAENGSCHQVLRVANNESDAEMSDLPWALARPSSKSNSKPDIRRNVNPKYRVDELNEPASRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPTIKGVGNDDFFETKSSFGVQVVQETKRRPLATKLTSKAVLAAAATDSAGCHRDSVLSLASVKLNQRLLISSSRDGAIKVWK* 1546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0284 1545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Vvi11g0284 1545 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0284 1545 Pfam HEAT repeat 535 563 IPR000357 GO:0005515
Vvi11g0284 1545 CDD STKc_Vps15 16 303 - -
Vvi11g0284 1545 Gene3D - 1167 1328 IPR015943 GO:0005515
Vvi11g0284 1545 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0284 1545 Gene3D Transferase(Phosphotransferase) domain 1 23 415 - -
Vvi11g0284 1545 ProSiteProfiles Trp-Asp (WD) repeats profile. 1512 1545 IPR001680 GO:0005515
Vvi11g0284 1545 Gene3D - 1336 1545 IPR015943 GO:0005515
Vvi11g0284 1545 Pfam WD domain, G-beta repeat 1122 1158 IPR001680 GO:0005515
Vvi11g0284 1545 FunFam Protein kinase family protein / WD-40 repeat family protein 629 837 - -
Vvi11g0284 1545 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1126 1158 - -
Vvi11g0284 1545 SUPERFAMILY WD40 repeat-like 1120 1545 IPR036322 GO:0005515
Vvi11g0284 1545 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0284 1545 ProSiteProfiles HEAT repeat profile. 535 567 IPR021133 -
Vvi11g0284 1545 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Vvi11g0284 1545 SUPERFAMILY ARM repeat 271 826 IPR016024 -
Vvi11g0284 1545 SMART WD40_4 1269 1310 IPR001680 GO:0005515
Vvi11g0284 1545 SMART WD40_4 1497 1545 IPR001680 GO:0005515
Vvi11g0284 1545 SMART WD40_4 1119 1158 IPR001680 GO:0005515
Vvi11g0284 1545 SMART WD40_4 1169 1206 IPR001680 GO:0005515
Vvi11g0284 1545 SMART WD40_4 1417 1451 IPR001680 GO:0005515
Vvi11g0284 1545 Gene3D - 669 843 IPR011989 -
Vvi11g0284 1545 Gene3D - 481 630 IPR011989 -
Vvi11g0284 1545 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 481 620 - -
Vvi11g0284 1545 ProSiteProfiles Trp-Asp (WD) repeats profile. 1126 1158 IPR001680 GO:0005515
Vvi11g0284 1545 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1545 IPR045162 GO:0004674|GO:0016236|GO:0045324
Vvi11g0284 1545 FunFam Os02g0796700 protein 1168 1328 - -
Vvi11g0284 1545 SUPERFAMILY Protein kinase-like (PK-like) 26 316 IPR011009 -
Vvi11g0284 1545 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1104 1167 - -
Vvi11g0284 1545 Gene3D - 1116 1166 IPR015943 GO:0005515
Vvi11g0284 1545 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1512 1545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0284 Vvi-Chr11 2407921 2419627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0284 23 252 AGC Kinase Gene Family AT5G04510 23.849 9.67e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Vvi11g0284 Pkinase 7.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0284 K08333 - vvi:100256057 3051.54