Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0245 ATGGTGGATTCTTGGCTCGTGGGTGCAGTCAGTTGTTCAAATTTTATAAATAAAGAGCCCTTATTCTCTTTAGAGCAATGCAATTTATATAGGAGGAGATTGGCTTTAGGAATCTCTGAATTGTTGGGTGAAGCTAGCTGTTGGAGAGTAATGGGAGAGTCTGCAAAGAAGACTACAGTTTACAAGGGTTTACTGAAGAATGAGGAGCTGTATCAGTATATCCTGGAGACTAGCGTCTACCCGCGTGAGCCCGAGCCTCTTAAGGAGCTTAGGGATGCTACCGCAGCCCACCCCAGGGCCATTATCGCTACTGCCCCAGACGCAGGTCAGTCAATAGACATGCTGTTGAAGCTTGTTAATGCAAAGAAGACAATTGAAATCGGAGTCTTCACCGGATACTCTCTTCTCCTCACTGCTCTTTCTATTCCCGATGATGGCAAGATTATAGCCATTGATGTGGATAGAAAGAACTATGAGATAGGGCTGCCGATTATCAGAAGAGCGGGTGTTGAACACAAAATCAACTTCATTGAGTCTCAAGCTCTGCCAGTTCTTGATAAACTTTTAGAAGATCATGAAAATGAAGGGAGTTTGGACTTCGCATTCGTTGATGCTGACAAGGGGAATTATAAGAACTACCATGAGAGGCTGATGAAGCTGTTGAAGGTTGGTGGGGTGGTGGTCTATGATAATACTCTCTGGCATGGAACAGTTGCTTTGCCTGAAGACTTGGTTGAAGAGCTGGTTGATGGGGAGTACAAGAAAGAGATGAGGAAGCATATAATGGAGCTTAACAAGTATCTGGCAACTGACTCTCGCGTTCAAATATGCGTAGCTCCATTGGGCGATGGCATCACCATCTGCAGGCGCATCTACTGA 879 0.4505 MVDSWLVGAVSCSNFINKEPLFSLEQCNLYRRRLALGISELLGEASCWRVMGESAKKTTVYKGLLKNEELYQYILETSVYPREPEPLKELRDATAAHPRAIIATAPDAGQSIDMLLKLVNAKKTIEIGVFTGYSLLLTALSIPDDGKIIAIDVDRKNYEIGLPIIRRAGVEHKINFIESQALPVLDKLLEDHENEGSLDFAFVDADKGNYKNYHERLMKLLKVGGVVVYDNTLWHGTVALPEDLVEELVDGEYKKEMRKHIMELNKYLATDSRVQICVAPLGDGITICRRIY* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0245 292 PANTHER O-METHYLTRANSFERASE-RELATED 59 291 - -
Vvi11g0245 292 CDD AdoMet_MTases 125 229 - -
Vvi11g0245 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 290 IPR029063 -
Vvi11g0245 292 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 63 291 IPR002935 GO:0008171
Vvi11g0245 292 Gene3D Vaccinia Virus protein VP39 53 292 IPR029063 -
Vvi11g0245 292 Pfam O-methyltransferase 76 291 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0245 Vvi-Chr11 2089787 2091615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0245 62 292 Monolignol Biosynthesis Gene Families AT4G26220 67.532 1.81e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0245 K00588 - vvi:100262946 473.396