Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0244 ATGAAAAGTGTCTGTTTTGGTGGCTGGCAGACTGGCTCTGGCAGAGAGCGGAACAGGCTGGAAAAGGTGGAAGGATCAGCAGAGAGGAAGGCGGTATTGCAGAGTTATGAGTTGGCCGCAGTGGCTACCACCCCAGATTCAGGTCAGTTACTAACCATGCTCTTGAAGCTAGCAAATACAAAAAAGACGATTGAAATCGGGGTTTTTACTGTATACTCCCTTCTCCTCACTGCTCTCTCCATTCCTGATGATGGCAAGCCTGAAAATGAAGGGTGCTTCGACTTTGCTTATGTTAATAGCGAGAACTACCATGAGAGGCTGATGAAGCTGGAGAAGATTGATGGGGTGGTGGTGTATGACAATGTGCTTCGGAGGGGATTCGTTGCAATGCCTGAAGAATTGCTTAGCGGAGAGAAGTGGAAACATGAAAGGCACTGGGCAATAGAGCTTAACAATCATCTAGCGACCGACCCCAAATTTTATAAATTTAATCATCTCGTAATTTTAATTGAGAAATGA 519 0.4547 MKSVCFGGWQTGSGRERNRLEKVEGSAERKAVLQSYELAAVATTPDSGQLLTMLLKLANTKKTIEIGVFTVYSLLLTALSIPDDGKPENEGCFDFAYVNSENYHERLMKLEKIDGVVVYDNVLRRGFVAMPEELLSGEKWKHERHWAIELNNHLATDPKFYKFNHLVILIEK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0244 172 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 160 IPR029063 -
Vvi11g0244 172 Gene3D Vaccinia Virus protein VP39 13 85 IPR029063 -
Vvi11g0244 172 PANTHER O-METHYLTRANSFERASE-RELATED 38 86 - -
Vvi11g0244 172 Gene3D Vaccinia Virus protein VP39 86 168 IPR029063 -
Vvi11g0244 172 Pfam O-methyltransferase 29 86 IPR002935 GO:0008171
Vvi11g0244 172 Pfam O-methyltransferase 91 160 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0244 Vvi-Chr11 2076570 2077865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0244 28 159 Monolignol Biosynthesis Gene Families AT4G26220 37.912 8.19e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0244 K00588 - vvi:100268094 140.198