Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0243 ATGGAACATAAAAACATTGAAGACCCATTTGGTAAAAGGGGGTTGTTGATGAATCATGAGTTATATCAGTATATTCTGGATACAAGTGTGTATCCTAGAGAACCAGAGCCCCTAAAGGAGCTCAGGCATGCTATGAAGGACCACCCTATGTCCTTCTTGGCTACTTCCCCTGATTCTGGCCAGTTTATGGCCTTGATATTGAGACTAATGAATGGCAAAAAGACTATAGAAATTGGAGTTTTCACCGGTTACTCCCTTCTACTTACTACTCTCTCAATTCCTGATGATGGCAAGATTACTGCCATAGATATGGATCGGAAAGCATATGAAGTAGGCTTGCCAATCATTAAAAGGCCGGGGTTGAGCACAAAATCAACTTCATTGAGTCCCCAGCTCTACCAGTTCTAG 408 0.4216 MEHKNIEDPFGKRGLLMNHELYQYILDTSVYPREPEPLKELRHAMKDHPMSFLATSPDSGQFMALILRLMNGKKTIEIGVFTGYSLLLTTLSIPDDGKITAIDMDRKAYEVGLPIIKRPGLSTKSTSLSPQLYQF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0243 135 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 135 IPR002935 GO:0008171
Vvi11g0243 135 Pfam O-methyltransferase 28 124 IPR002935 GO:0008171
Vvi11g0243 135 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 124 IPR029063 -
Vvi11g0243 135 Gene3D Vaccinia Virus protein VP39 5 128 IPR029063 -
Vvi11g0243 135 PANTHER O-METHYLTRANSFERASE-RELATED 12 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0243 Vvi-Chr11 2074875 2075548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0243 13 124 Monolignol Biosynthesis Gene Families AT4G26220 60.714 1.21e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0243 K00588 - vvi:100268094 168.318