Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0237 ATGTTGAAGGATGTTGTGAGAACTAAGACCTATCAAAATGTCATTTATAAGAATAAGTTTCTGTTCAAGAACAAAGTAGTCCTTGATGTGGGAGCAGGGACTGGAATTCTGTCCCTCTTTTGTGCAAAGGCAGGGGCAAAACATGTTTATGCGGTTGAGTGTTCCCATATGGCTGACATGGCAAAAGAGATTGTTGAAGTAAATGGATTTTCTGATGTTATAACAGTTATGAAAGGAAAGGTTGAAGAAATTGTTCTTCCTGTTGCTCAAGTGGATATCATTATATCAGAATGGATGGGCTACTTTTTGTTGTTTGAGAATATGTTAAATACAGTCCTATATGCTCGTGATAAATGGCTTGTGAATGATGGTATTGTGCTGCCAGACAAAGCATCTCTCTATTTGACAGCCATTGAGGATGCGGAGTACAAAGAAGACAAGATTGAATTTTGGAACAGTGTGTATGGCTTTGACATGAGCTGTATCAAGAAGCAAGCAATGATGGAACCACTTGTGGACACAGTTGATCAGAATCAGATCGTCACAAACTGCCAGTTACTCAAGACTATGGACATCTCTAAAATGGCTCCTGGGGATGCTTCCTTCACAGCTCCTTTTAAGCTTGTGGCATCACGCGATGATTACATCCATGCTCTTGTAGCATATTTTGATGTATCATTTACCAAGTGTCATAAATTGACAGGCTTCTCCACAGGGCCAAGATCACGGGCTACACATTGGAAACAAACAGTCCTGTATCTGGAAGATGTGCTAACCATATGCGAAGGGGAGACAGTTGTTGGGAGCATGACAGTGGCCCAGAACAAGAAGAATCCTCGTGACGTTGATATAATGATCAAATATTCCTTCAATGGTCAGCGTTGCCAGGTCTCAAGAACTCAATATTACAAGATGCGTTAG 921 0.4093 MLKDVVRTKTYQNVIYKNKFLFKNKVVLDVGAGTGILSLFCAKAGAKHVYAVECSHMADMAKEIVEVNGFSDVITVMKGKVEEIVLPVAQVDIIISEWMGYFLLFENMLNTVLYARDKWLVNDGIVLPDKASLYLTAIEDAEYKEDKIEFWNSVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMAPGDASFTAPFKLVASRDDYIHALVAYFDVSFTKCHKLTGFSTGPRSRATHWKQTVLYLEDVLTICEGETVVGSMTVAQNKKNPRDVDIMIKYSFNGQRCQVSRTQYYKMR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0237 306 Gene3D - 130 306 - -
Vvi11g0237 306 FunFam Blast:Protein arginine N-methyltransferase 1 130 306 - -
Vvi11g0237 306 Pfam Ribosomal protein L11 methyltransferase (PrmA) 22 99 - -
Vvi11g0237 306 FunFam probable protein arginine N-methyltransferase 1 1 128 - -
Vvi11g0237 306 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 297 IPR025799 GO:0016274|GO:0018216
Vvi11g0237 306 Gene3D Vaccinia Virus protein VP39 1 128 IPR029063 -
Vvi11g0237 306 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 306 IPR025799 GO:0016274|GO:0018216
Vvi11g0237 306 CDD AdoMet_MTases 27 127 - -
Vvi11g0237 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 305 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0237 Vvi-Chr11 2016844 2020739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0237 1 269 C2H2 Transcription Factor Family AT3G12270 39.863 1.94e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0237 K11434 - vvi:100266357 617.461