Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0223 ATGAAGATGGCTTCGTCTTCGCTCTTCGTTTTCTTCGTTGTTCTCCTCTGCCTCGCTTCTCGGCCGTCGCACTCGCACACTGAGTCGAGTCTGTTGGAGGACACCAATGCGACGGCGGAGTCCAACGCCTCGCGGTCGAGATCTCAGGACAGCTTCGCCGACATGATCGATCGGGCGCTGGAGAAGGAGTTCACGGAAAATGAACAAACCGGAGCCAGTGATGCTGGTAGCTTCAACAACAGTGTTGCGGAACAGCAGGCAGTTTTGGAAACTGTTGCTAGAGTTAGGCCCAAGAAAAACGACACGAAGGAGGAGAAGTCATTTCAGCTTCACAATGTTTTCAATTTGGATAATGAGAACAGACAAGAAGATACACCAACATTGATAGATCGAAAGGACAATGTTTTTATTATGTCCAATCCCAAGTCAAAGTACCCTGTGCTACAGTTAGACTTGAGATTGATATCAGATTTGGTTGTTGTCATTGTTTCTGCAACTTGTGGCGGCATCGCCTTTGCTTGTGCTGGACAGCCGGTTATTACTGGATATCTACTGGCAGGATCTGTTATTGGACCTGGAGGTTTAAGTTTTGTTAGTGAAATGGTGCAAGTTGAAACGGTAGCTCAGTTTGGTGTGATTTTTCTTCTTTTTGCATTAGGCTTGGAGTTCTCCACGACAAAGCTTCGTGTCGTTCGGGCAGTTGCTGTTTTAGGAGGTCTGCTCCAGATTTTCTTATTTATGTGCTTGTGTGGAATCACTGCCTCGCTATGTGGTGGCAAACCTTCTGAGGGGGTATTTGTTGGTGTATTACTTTCCATGTCTTCGACAGCAGTGGTTTTGAAATTTTTGATGGAAAGAAATAGTATCAGTGCTCTTCACGGTCAGGTTACAGTTGGCACTCTTATTCTGCAGGATTGTGCTGTGGGCTTGCTATTTGCTCTTCTTCCAGTCCTAGGTGGTACTTCGGGTATTCTTCAAGGAGTAATATCAATGACAAAATCGTTGGTGGTTTTGATAACTTTTTTGGCCATTTTGTCAATACTATCTCGTACTTGTGTCCCTTGGTTCCTTAAGCTGATGGTTAGCCTATCATCACAGACTAATGAACTTTATCAATTGGCTTCAGTGGCATTCTGCTTACTCGTTGCTTGGTGTAGTGATAAGCTGGGTCTAAGCCTTGAACTTGGTTCCTTTGCTGCTGGAGTGATGATATCAACAACTGATCTTGCTCAACACACTCTTGAACAAGTTGAGCCTATCCGCAACTTCTTTGCCGCTCTTTTTCTCGCCAGCATTGGGATGTTGATACATGTTCATTTCCTTTGGAATCACGTTGATATTTTACTCGCAGCTGTTATATTGGTGATCATTATAAAAACTATTGTGGTTTCTACAGTGGTCAAGGGATTTGGATACAACAATAAGACTTCACTTCTTGTTGGAATGTCTCTGGCACAAATTGGGGAGTTTGCTTTTGTTCTTCTAAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGCAAATTGTACTTACTGCTTCTCGGCACTACTGCTCTCAGTCTGGTCACAACACCATTGCTTTTCAAGCTGATTCCTGCTGTTGTACATCTTGGGGTACTGTTGCGGTGGTTCTCTCCTGATGTTCCAAGTGAGATTGGATTTAAAGGAGATAGCTTTCGAGCAGACAGTGCTAAGCGTATTACTTTGATGGTCCAAGGCTCTCATGATTCATGA 1731 0.4414 MKMASSSLFVFFVVLLCLASRPSHSHTESSLLEDTNATAESNASRSRSQDSFADMIDRALEKEFTENEQTGASDAGSFNNSVAEQQAVLETVARVRPKKNDTKEEKSFQLHNVFNLDNENRQEDTPTLIDRKDNVFIMSNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSVIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLCGGKPSEGVFVGVLLSMSSTAVVLKFLMERNSISALHGQVTVGTLILQDCAVGLLFALLPVLGGTSGILQGVISMTKSLVVLITFLAILSILSRTCVPWFLKLMVSLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVVSTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDVPSEIGFKGDSFRADSAKRITLMVQGSHDS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0223 576 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 9 567 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vvi11g0223 576 MobiDBLite consensus disorder prediction 26 50 - -
Vvi11g0223 576 Pfam Sodium/hydrogen exchanger family 159 528 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi11g0223 576 MobiDBLite consensus disorder prediction 26 51 - -
Vvi11g0223 576 Gene3D - 152 535 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0223 Vvi-Chr11 1922146 1942843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0223 20 576 Antiporters AT2G19600 83.808 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0223 - - vvi:100252607 1034.63