Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0199 ATGACCAAAGGCTATGTGCCATCAATGCCACCAAGTAATCCAAGAATGTCACCACCACATTATAAAACTCCTCCACACTTAAAGGTTCCAATAACTCTACCATCCGTCCCACCAAGTGCTTCTCAAAGGAAGGCACCTGATAATAAGGCTCCTGTTTGGGCTCCAGTTGCTCCAATTGCTCCAGTTGCTCCAGTACCAGATGGACCACCTCAGAGGAAATGGCCACAAAATCCTCCATCCATGCACCCACACCCAGTGATGCCTGGATTACTGCCACCAAGTGCTCACAATAGGAACAAGCCAGATAATAAGGCTCCAATCTCAACGCCAATTGCCCCAGATCCTGATGTCACTCCAATATCAACTCCTCCCCTAGCAAGTCACTGGAGAAGAAAACAAATGCCGGTTGCTGCACCTCCAAACAGAACACCTGACCCACTGTCACCAGTGAACCATTCCCCGGCTAAAGCACCTTCTATACACAATGCCATGAGGCATAGTAATGCACCTGCTTCTCTTTCAACTCCACAATCTCCTACAAATAAAGGGTCCCAGTCTCCTGCATCTTCACCGTCAATGTCATTTTCTAAGCATCATCGTGGAAGGAACAAAATCACCGGCCCTGCTCCTGCATCATCATATCTCATTCCTCCACCCTCACCAAGGCATCAAGGTCCAGTCATCTCTCCAGCTCCTTCACATCCTCCTAAATCACTTCCAAATAGAACACGAACGCACCACGCTCCTCTGCCACTAAATCCTGGTTCTAGAATCTCTCCAGCCCATTCTCCCTCTCCTTCATCATTGACCTATCCTTCACCTGCACCTTCACCATCTCCAACAGCTCGATCTGGCCAGACTATGATTCCCTTTCTTTCCCCTAAAATTTCTCCTTCTCGGCTACCCCCAAGTTCAAAGATGCCAGCCCCGCCACCAGTTCAAGCGTTACCACCCCCACCTCCTAATCAAGATTGTTCAGCAATTGTCTGCACAGAGCCAAATACAAATACTCCTCCTGGGTCACCATGTGGCTGTGTCTTGCCAATGCAAGTTCAGTTGCGCCTTAATGTTGCACTGTATACCTTCTTCCCTTTGGTTTCAGAGCTGGCTGAGGAGATTGCTGCTGGGGTTTTTATGAGACAAAGTCAAGTTCGCATAATGGGAGCCAATGCAGCTAGCCCGGAAGCAGAAAAGACAATTGTCCTCATTGACTTGGTCCCTCTTGGGGAAAAATTTGATAATACTACAGCTTTTTTAACCTATCAGAGATTCTGGGGCAAGCAGGTTGTCATAAAAAATTTGTTTTTTGGTGATTATGAAGTAATATATGTGAACTATCCAGGCCTACCCCCTTCTCCACCTTCAGCGCCTTCAAGCATTACTATGATAGATAATGGACCATATTCTGGTCAAGGCAATAATGGGAGGACAATACACCCGCTAGGGGTCGATGTGCACAAGAACCGACATAAACATGGGCTTAGTGGCAGTGTAATTGCTATTATAGTTTTGTCAGCCTCTGTTGCTGTGGTTTTATGTTCTGCTGTTGCTTGGGTTTTTCTGTTCAAAAAAACAGATTGTATTGGCCAACCAGTGCCAACTCAAGCAGCTTTGGTGCCTTCACTTGCAAGACCACCAGGTGCTGCTGGATCTGTGGTTGGAAGTGCGCCCAGCTCAGCTTCATTATCATTTGGATCTAGCATTGCAACTTATACAGGATCTGCCAAGACTTTCAGCGCAGCTGACATAGAGAGAGCCACTGATAATTTTGATGATTCAAGAATACTTGGGGAAGGTGGCTTTGGGCGTGTTTATAGTGGGGTTCTTGAAGATGGAACAAAAGTGGCTGTTAAGGTTCTTAAACGAGATGATCATCAGGGAGGTCGGGAATTTTTGGCTGAAGTTGAGATGCTTAGTCGTCTTCATCATAGAAATTTGGTCAAGTTAATTGGTATATGTACAGAGGAGCGTACCCGCTGCTTAGTGTATGAACTCATTCCAAATGGCAGTGTGGAGTCCCATTTACATGGAGCTGACAAGGAAACTGCTCCACTTGATTGGGGTGCCCGGATAAAGGTGGCGCTTGGTGCTGCTCGTGGTCTGGCCTATCTGCATGAAGATTCAAGCCCCCGTGTCATACACAGGGACTTCAAGTCCAGCAACATCTTATTGGAACATGATTTTACACCAAAAGTGTCCGACTTTGGTTTGGCTCGCACAGCCATGGATGAGGAAAACAGACACATCTCAACACGTGTCATGGGAACTTTTGGGTATGTGGCTCCAGAGTATGCAATGACTGGCCATCTTCTTGTGAAGAGTGATGTTTATAGCTATGGAGTAGTCCTTCTTGAGCTCCTAACAGGAAGAAAACCTGTAGACATGTCACAACCGCCTGGTCAGGAAAATCTAGTTGCTTGGGCCCGTCCTCTCCTCACAAGTAAAGAAGGGTTACAAACAATGATAGACCTATCTCTAGGATCTGATGTTCCTTTTGACAGTGTGGCCAAAGTAGCTGCTATCGCTTCAATGTGTGTTCAACCAGAGGTGTCACACCGTCCTTTTATGGGTGAGGTTGTTCAAGCCTTGAAGCTAGTTTGCAATGAGTGTGATGAGACAAAAGAAGCAGGTTCAAAAAGTGGCAGCCAGGAGGATTTGTCCCTTGATTTGGACACTGGGGTCAGCTCTGCTTCAGGGCAGTTGCCTGATCCTTCACATGCCCATTTCCCAGTTTCTACGTATGGTTCTGGCCTTGATGCTGAAACTGGACTCTCAGTATCAGAATTATTCAGCACATCAGCAAGATTTGGGAGGCAGCCATCCGGGTCATTTAGGAGGTACTCTAGCTCAGGTCCTCTGAGAACAGGAAGGGCTAGGCACTTCTGGCAGAGGATGAGAAGAAATTCTGGCGGCAGTGTGAGTGAGCATGGAATTATGTTCAGATTACGGCCAGGTTCCCATTGA 2964 0.4693 MTKGYVPSMPPSNPRMSPPHYKTPPHLKVPITLPSVPPSASQRKAPDNKAPVWAPVAPIAPVAPVPDGPPQRKWPQNPPSMHPHPVMPGLLPPSAHNRNKPDNKAPISTPIAPDPDVTPISTPPLASHWRRKQMPVAAPPNRTPDPLSPVNHSPAKAPSIHNAMRHSNAPASLSTPQSPTNKGSQSPASSPSMSFSKHHRGRNKITGPAPASSYLIPPPSPRHQGPVISPAPSHPPKSLPNRTRTHHAPLPLNPGSRISPAHSPSPSSLTYPSPAPSPSPTARSGQTMIPFLSPKISPSRLPPSSKMPAPPPVQALPPPPPNQDCSAIVCTEPNTNTPPGSPCGCVLPMQVQLRLNVALYTFFPLVSELAEEIAAGVFMRQSQVRIMGANAASPEAEKTIVLIDLVPLGEKFDNTTAFLTYQRFWGKQVVIKNLFFGDYEVIYVNYPGLPPSPPSAPSSITMIDNGPYSGQGNNGRTIHPLGVDVHKNRHKHGLSGSVIAIIVLSASVAVVLCSAVAWVFLFKKTDCIGQPVPTQAALVPSLARPPGAAGSVVGSAPSSASLSFGSSIATYTGSAKTFSAADIERATDNFDDSRILGEGGFGRVYSGVLEDGTKVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEERTRCLVYELIPNGSVESHLHGADKETAPLDWGARIKVALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKEGLQTMIDLSLGSDVPFDSVAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNECDETKEAGSKSGSQEDLSLDLDTGVSSASGQLPDPSHAHFPVSTYGSGLDAETGLSVSELFSTSARFGRQPSGSFRRYSSSGPLRTGRARHFWQRMRRNSGGSVSEHGIMFRLRPGSH* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0199 987 MobiDBLite consensus disorder prediction 165 196 - -
Vvi11g0199 987 MobiDBLite consensus disorder prediction 57 90 - -
Vvi11g0199 987 ProSiteProfiles Protein kinase domain profile. 590 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0199 987 MobiDBLite consensus disorder prediction 11 25 - -
Vvi11g0199 987 Gene3D Phosphorylase Kinase; domain 1 565 665 - -
Vvi11g0199 987 PANTHER OS01G0750732 PROTEIN 317 891 - -
Vvi11g0199 987 FunFam Receptor-like serine/threonine-protein kinase ALE2 666 883 - -
Vvi11g0199 987 MobiDBLite consensus disorder prediction 212 237 - -
Vvi11g0199 987 Pfam Protein tyrosine and serine/threonine kinase 594 863 IPR001245 GO:0004672|GO:0006468
Vvi11g0199 987 SUPERFAMILY Protein kinase-like (PK-like) 569 863 IPR011009 -
Vvi11g0199 987 MobiDBLite consensus disorder prediction 874 904 - -
Vvi11g0199 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Vvi11g0199 987 MobiDBLite consensus disorder prediction 1 320 - -
Vvi11g0199 987 MobiDBLite consensus disorder prediction 880 902 - -
Vvi11g0199 987 CDD STKc_IRAK 596 864 - -
Vvi11g0199 987 Gene3D Transferase(Phosphotransferase) domain 1 666 887 - -
Vvi11g0199 987 MobiDBLite consensus disorder prediction 301 320 - -
Vvi11g0199 987 FunFam receptor-like serine/threonine-protein kinase ALE2 563 665 - -
Vvi11g0199 987 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0199 Vvi-Chr11 1761397 1767250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0199 24 987 Receptor kinase-like Gene Family AT5G56890 57.201 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vvi11g0199 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0199 - - vvi:100254143 1833.92