Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0181 ATGGACTACAGAGCTGCTCTCTCCGATTCCAACGACTTCAGTGGCAGTAGCAGCATCTGCTGCATCGCAGCCACCACCGAATCCCTTTCCTCAGAGGTTTCTCCGCCGGACATCTCGGCTCTCAGGCGCCTTTCGGAGAATCTCGAGTCGGTGTTCGAGTCCCCCGAGTTTGACTTCTTCACAGACGCCAGGATCGTGGTCGCCGGAGGCCGGGAGGTGCCGGTGCACCGGTGCATTCTTGCGGCGAGGAGCGTGTTTTTCAAGGCCGTGTTGGCGGGGGCGAGGAAGGAGAAGGAGGCGAAGTTCGAGCTGAAGGATTTGGCGAAGGAATTCGATGTTGGGTACGACTCGCTCGTGGCGGTTTTGGGGTATTTGTATAGTGGGAGAGTTGGGGCGTTGCCAAAAGGCGTTTGTGCGTGCGTTGATGATGATTGCCCCCACTCCGCTTGTAGGCCCGCTGTGGATTTCATGGTGGAGGTGCTCTATGCTTCTTTCGCTTTTCAGATCTCTGAATTGGTCGGCCTTTATCAGAGACGCCTGATGGACATTCTTGACAAGGTTGCTTCAGATGACATTTTAGTGATTCTATCAGTTGCTAATCTGTGTGGTAAAGCATGTGATAGATTGTTAGCGAGGTGTATTGACATTATCATCAAATCTGATGTGGATGTCGTGACTCTGGAGAGGGCCTTGCCCCAAGAAATGGTGAAACAGATTGTGGATTCGCGATTGGAGCTTGGCTTTGAGGAGCCTGAAAGCACCAATTTTCCTGACAAACATGTGAAGAGGATACACCGGGCTCTGGATTCAGATGATGTTGAATTGGTGAGGATGCTACTGAAAGAGGGACATACTACTCTAGATGATGCATATGCCCTTCACTATGCTGTGGCATTTGGTGATGCAAAGACCACAACCGAGCTTCTTGATCTTGGACTTGCTGATGTTAACCATAAAAATCATAGGGGCTATACTGTGCTACACATTGCTGCAATGCGGAAAGAGCCCAAGATTATAGTATCCCTTCTTACTAAGGGAGCTCGGCCAACTGATATCACGCCAGACGGTAGAAATGCACTGCAAATAGCAAAGAGGCTCACCAGGGCTGTGGATTACCATAAGTCTACCGAGGAAGGAAAACCTTCTCCCAAGGATCAGTTGTGCGTAGAGGTATTGGAGCAAGCGGAAAGACGAGATCCATTGATAGGGGAGGCTTCGTTTTCTCTTGCTATAGCAGGCGATGATCTGCGAATGAAGCTGTTGTACCTCGAAAATAGAGTTGGACTAGCAAAACTTCTATTCCCCATGGAAGCTAAAGTGGCAATGGATATTGCACAAGTGGATGGCACTTCTGAGTTTACACTCACTGCAATCAGGCCTAGGAATTTGGCTGATGCCCAGAGGACAACTGTGGACTTAAACGAGGCGCCTTTCAGAATTAAAGAGGAGCACCTAAATAGGCTAAGAGCACTGTCCAAAACTGTGGACCTTGGGAAACGCTTTTTCCCTAGATGCTCAGAAGTACTCAACAAGATCATGGATGCCGATGACTTATCAGATTTGGCATACCTGGGCAACGGCACTACAGAGGAGCGACTTCTGAAGAAGAGGAGGTACAAGGAACTCCAGGACCAACTGTGCAAGGCATTCAATGAAGACAAAGAGGAGAATGATAAGTCTAGGATATCATCCTCATCATCATCCACATCTCTAGGGTTTGGAAGGAATAACAGTAGACTCTCTTGCAAGAAGTAA 1755 0.4883 MDYRAALSDSNDFSGSSSICCIAATTESLSSEVSPPDISALRRLSENLESVFESPEFDFFTDARIVVAGGREVPVHRCILAARSVFFKAVLAGARKEKEAKFELKDLAKEFDVGYDSLVAVLGYLYSGRVGALPKGVCACVDDDCPHSACRPAVDFMVEVLYASFAFQISELVGLYQRRLMDILDKVASDDILVILSVANLCGKACDRLLARCIDIIIKSDVDVVTLERALPQEMVKQIVDSRLELGFEEPESTNFPDKHVKRIHRALDSDDVELVRMLLKEGHTTLDDAYALHYAVAFGDAKTTTELLDLGLADVNHKNHRGYTVLHIAAMRKEPKIIVSLLTKGARPTDITPDGRNALQIAKRLTRAVDYHKSTEEGKPSPKDQLCVEVLEQAERRDPLIGEASFSLAIAGDDLRMKLLYLENRVGLAKLLFPMEAKVAMDIAQVDGTSEFTLTAIRPRNLADAQRTTVDLNEAPFRIKEEHLNRLRALSKTVDLGKRFFPRCSEVLNKIMDADDLSDLAYLGNGTTEERLLKKRRYKELQDQLCKAFNEDKEENDKSRISSSSSSTSLGFGRNNSRLSCKK* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0181 584 FunFam Non-expressor of PR1 35 219 - -
Vvi11g0181 584 Gene3D - 233 458 IPR036770 -
Vvi11g0181 584 SUPERFAMILY POZ domain 55 182 IPR011333 -
Vvi11g0181 584 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 233 386 - -
Vvi11g0181 584 Pfam BTB/POZ domain 58 130 IPR000210 GO:0005515
Vvi11g0181 584 CDD BTB_POZ_NPR_plant 42 184 - -
Vvi11g0181 584 ProSiteProfiles Ankyrin repeat region circular profile. 322 347 - -
Vvi11g0181 584 PANTHER REGULATORY PROTEIN NPR3 7 571 IPR044292 GO:0009862|GO:2000022|GO:2000031
Vvi11g0181 584 SUPERFAMILY Ankyrin repeat 260 365 IPR036770 -
Vvi11g0181 584 MobiDBLite consensus disorder prediction 552 584 - -
Vvi11g0181 584 Pfam Domain of unknown function (DUF3420) 221 265 IPR024228 -
Vvi11g0181 584 ProSiteProfiles BTB domain profile. 61 134 IPR000210 GO:0005515
Vvi11g0181 584 ProSiteProfiles Ankyrin repeat profile. 322 347 IPR002110 GO:0005515
Vvi11g0181 584 Gene3D Potassium Channel Kv1.1; Chain A 32 218 IPR011333 -
Vvi11g0181 584 Pfam NPR1/NIM1 like defence protein C terminal 364 569 IPR021094 -
Vvi11g0181 584 MobiDBLite consensus disorder prediction 562 584 - -
Vvi11g0181 584 SMART ANK_2a 322 351 IPR002110 GO:0005515
Vvi11g0181 584 SMART ANK_2a 288 318 IPR002110 GO:0005515
Vvi11g0181 584 SMART ANK_2a 259 287 IPR002110 GO:0005515
Vvi11g0181 584 Pfam Ankyrin repeats (3 copies) 293 365 IPR002110 GO:0005515
Vvi11g0181 584 SMART BTB_4 61 184 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0181 Vvi-Chr11 1613091 1616479 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vvi11g0181 NPR1_like_C 5e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0181 K14508 - vvi:100250996 1117.45