Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0151 ATGGAGAAGTGTTTCGGATTAATAGTCAAGAGGTTCATGTTCATATCACAAATGGGAAAACTTGACTCCCATCTTGAAGAGAACAATTTTTTAGTTATTACGGTTGTCACAAATATATCAAAAGTGTTTCCAAAGGATACTGAAGCTCCTCCTGGAGGTGTAGATGATATGACAAAGCTTTCATATTTGCATGAACCAGGAGTTCTGCAAAACTTGGCTACCAGATATGAACTTAATGAAATCTATACATACACTGGAAATATCCTGATTGCTGTAAACCCTTTTCAAAGATTACCACATCTATATGATACACACATGATGGAGCAGTATAAAGGAGCTACATTTGGAGAGCTAAGCCCTCATGTTTTTGCAGTTGCAGATGTTGCATTTAGGGCAATGATGAATGAGGGAAAGAGCAACTCAATTCTGGTAAGTGGAGAAAGTGGTGCCGGTAAGACTGAGACAACCAAGATGCTCATGAGATATCTTGCATACTTGGGTGGTCGATCTGGAGTAGAAGGAAGGACAGTTGAACAACAAGTTCTAGAATCCAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAACAACAATTCAAGTCGTTTTGGCAAATTTGTTGAGATCCAATTTGATAAAAACGGGAGGATATCTGGGGCAGCTATACGAACTTACCTGCTTGAAAGGTCTCGTGTTTGCCAAATTTCAGATCCCGAAAGAAATTACCATTGCTTTTACCTTCTTTGTGCTGCACCACCTGAGGAAAGAGAGAAGTATAAGTTGGGAAACCCTAAATCATTCCATTATTTAAATCAATCTAATTGCTATGAACTGGATGGAGTAAATGATGCTCATGAATATCATGCAACCAGAAGGGCCATGGATGTGGTTGGAATCAGTGAGGAAGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCTGTTCTTCATCTTGGTAATATTGAATTTGCAAAGGGAAAGGACATTGACTCTTCCATTATTAAGGATGAAGAGTCTAGGTTTCACCTTAACATGACAGCAGAGCTCCTTAACTGTGATGCCAAGGGCTTGGAAGATGCAATGATTAAGCGTGTAATGGTGACACCAGAAGAAGTTATTACTAGACCGCTTGATCCTGATTCTGCGTTGGGTAGCAGGGATGCCTTAGCTAAAACGATATACTCTCGCTTGTTTGATTGGCTTGTGAATAAAATTAATGATTCAATTGGGCAAGATCCAAACTCAAAATCATTAATTGGAGTTCTCGATATTTATGGTTTTGAAAGTTTTAAGTTCAATAGTTTCGAGCAGTTCTGTATTAATTTTACAAATGAAAAACTGCAACAACATTTCAATCAGCATGTCTTTAAAATGGAGCAGGAAGAGTATACGAAAGAAGAAATAAATTGGAGCTATATCGAATTTGTGGATAATCAAGACGTGTTGGATTTGATTGAGAAGAAACCTGGAGGAATTATCGCACTTCTAGATGAAGCCTGCATGTTTCCAAAGTCAACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTTAAAAATAACAAGCGGTTTATCAAACCTAAGCTTTCTCGTACTAGTTTTAGCATCTCACACTATGCAGGGGAAGTAACATATCTGGCTGATCTGTTCCTTGACAAAAACAAGGACTATGTGGTGGCAGAACATCAAGATCTATTGTCAGCCTCAAAGTGCCCCTTTGTGGCAAGCCTATTTCCTCTTCTTCCAGAGGAATCATCAAAGTCATCCAAGTTTTCTTCTATTGGTTCACGTTTCAAGCTACAACTTCAATCTTTGATGGAGACCTTGAATTCAACTGAGCCTCACTATATCAGATGTGTGAAGCCAAACAATGTCCTCAAGCCTGCTATCTTTGAGAATTTGAACATAATCCAACAATTACGTTGTGGTGGTGTCCTCGAGGCAATTAGGATCAGCTGTGCTGGATATCCCACAAGGCGAACCTTCTATGAGTTTCTTCTCCGTTTTGGTGTTCTTGCTCCAGAAGTTTTGGAAGGAAACTATGATGACAAAGTTGCATGCCAAATGATTCTGGATAAAAAGGGACTGAAAGGTTATCAGGTAGGCAAGACAAAGGTCTTCTTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCAGCCAGAATCATTCAGAGGCAAATTCGTACATATATTGCACGCAAGGAGTTTATGGCATTACGCAAAGCTGCCATTCAACTGCAATCTCAATGGCGAGGTAAATTGGCTTGCAAGCTGTATGAGCAGATGCGTCGAGAAGCATCAGCAGTGAGGATTCAAAAGAATTTACGACGTTATACTGCCAGGAAATCCTATTTAACAGTATGGTCAACTGCAATCACACTGCAGACAGGCTTAAGAGCAATGACTGCTCGCAATGAATTCAGATTCAGAAAGCAAACTAAGGCGGCAATTCTTATACAGGCTCATTTGCGTTGCCACAGGGCATATTCTTATTATAAGAGCCTTCAGAAAGCTGCAATTGTTTCTCAATGTGGTTGGAGGCGAAGAGTTGCTCGGAGAGAGCTTAGGAAGCTCAAAATGGCTGCTAGAGAAACAGGGGCTCTCAAAGAGGCAAAAGACAAGCTAGAAAAGCGTGTAGAAGAACTTACATGGCGTCTGCAGTTTGAGAAACGATTAAGGACTGATTTGGAAGAGGCAAAGGCCCAAGAAATTGCTAAGTTTCAGGATGCTTTGCATGAAATGCAATTACAAGTAGAAGAAGCAAATGCTAGAGTTATCAAAGAACAAGAGGCAGCTCGAAAAGCTATTGAAGAAGCACCTCCAGTGATTAAGGAGACCCCTGTTATAGTTCAAGACACAGAAAAGATTGATTTGTTAACAGCTGAGGTTGAGAGTTTGAAGGCATTACTGCTATCAGAAAGTAAGGCAGCAGAAGAGGCTAGGAAAGCTAGTACAGATGCTGAGGCCAGGAATGCAGAACTAGTTAAAAAGCTTGAAGATGCAGATCGCAAAATGGATCAGCTTCAAGATTCTATGCAGAGGTTAGAAGAGAAGCTTTCCAATTCAGAGTCAGAGAATCAAGTACTACGTCAGCAAGCACTGGCCATGTCTCCAACTAGAAAAGCTGTATCTGCACTACCGAAGCCTACAATTGTCCAGAGGACACCAGAGAATGGAAATATTGTAAATGGAGAGATGAAGGTTGCATCGGACTTGACGCTTTCTATATCAAACCCACGTGAAACTGAATCTGAGGAAAAACCACAGAAATCTTTGAATGAAAAGCATCAGGAGAACCAGGACTTGCTGATCAGGTGTATTACACAAAACTTGGGATTCTCTGGCAGCAAACCAGTTGCTGCTTGTGTCATATACAAGTGCCTTCTTCACTGGAGATCCTTTGAAGTTGAAAGAACTAGCGTTTTTGATCGCATCATTCAAACAATTGCTTCAGCTATAGAGGTTCATGATAACAATGATGTATTAGCATATTGGCTATCTAATTCATCCACACTGTTGCTGCTTCTCCAACACACACTCAAAGCCAGTGGAGCTGCTAGCTTGACTCCTCAACGGCGGAGAGCAACATCAGCTTCTCTCTTTGGGAGGATGTCTCAAGGGTTACGCACACCTCCTCAAAGTGCTGGAATCTCATTTCTCAATGGGCGAATGCTTGGTAGACCTGATGACTTACGGCAAGTTGAGGCCAAGTATCCAGCACTATTGTTCAAACAACAGCTTACTGCATTCCTTGAGAAGATCTATGGAATGATAAGAGACAGTCTAAAGAAAGAAATTGCCCCATTGATCGGATTATGTATCCAAGCACCTAGGACATCACGGGCAAGTTTAGTAAAAGGGCGTTCTCAAGCTAATGCTGTTGCTCAACAAGCTTTGATGGCTCATTGGCAAAGCATTGTGAAAAGCCTAAACAGTTACTTGAAGACAATGAAAGCAAACTATGTACCTCCTTTCTTGGTCCGCAAAGTGTTCACACAGATCTTTTCATTCATTAATGTTCAGCTATTCAACAGTCTTCTTCTGCGACGGGAGTGCTGTTCATTCAGTAACGGGGAGTATGTAAAGTCAGGTTTGGCTGAACTAGAACAGTGGTGCTCCTATGCAACTGAGGAGTACGCAGGCTCAGCCTGGGATGAATTGAAGCATATTAGACAGGCCGTTGAATTTCTGGTCATACATCAAAAGCCCAAAAAGACCTTGAATGAAATAATGAAAGAACTTTGCCCTGTGCTCAGCATACAACAATTATACAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACACAGTGTGTCTTCAGAAGTTATTTCAAGTATGAGAATTATGATGACCGAGGCCTCCAACAATTCTGTTAGCAGTTCTTTCCTATTGGACGACGACTCAAGCATCCCTTTCACTGTGGATGACATCTCCAAGTCAATGAAACAAGTTGACACTGACGTCGATCCTCCATCATTAATTCGCGAAAACTCCGGTTTTGTGTTCTTACTCCAACGGTCAGAGTGA 4560 0.4121 MEKCFGLIVKRFMFISQMGKLDSHLEENNFLVITVVTNISKVFPKDTEAPPGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGATFGELSPHVFAVADVAFRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLGNPKSFHYLNQSNCYELDGVNDAHEYHATRRAMDVVGISEEEQEAIFRVVAAVLHLGNIEFAKGKDIDSSIIKDEESRFHLNMTAELLNCDAKGLEDAMIKRVMVTPEEVITRPLDPDSALGSRDALAKTIYSRLFDWLVNKINDSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFSISHYAGEVTYLADLFLDKNKDYVVAEHQDLLSASKCPFVASLFPLLPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLEGNYDDKVACQMILDKKGLKGYQVGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFMALRKAAIQLQSQWRGKLACKLYEQMRREASAVRIQKNLRRYTARKSYLTVWSTAITLQTGLRAMTARNEFRFRKQTKAAILIQAHLRCHRAYSYYKSLQKAAIVSQCGWRRRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQFEKRLRTDLEEAKAQEIAKFQDALHEMQLQVEEANARVIKEQEAARKAIEEAPPVIKETPVIVQDTEKIDLLTAEVESLKALLLSESKAAEEARKASTDAEARNAELVKKLEDADRKMDQLQDSMQRLEEKLSNSESENQVLRQQALAMSPTRKAVSALPKPTIVQRTPENGNIVNGEMKVASDLTLSISNPRETESEEKPQKSLNEKHQENQDLLIRCITQNLGFSGSKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAIEVHDNNDVLAYWLSNSSTLLLLLQHTLKASGAASLTPQRRRATSASLFGRMSQGLRTPPQSAGISFLNGRMLGRPDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDSLKKEIAPLIGLCIQAPRTSRASLVKGRSQANAVAQQALMAHWQSIVKSLNSYLKTMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLAELEQWCSYATEEYAGSAWDELKHIRQAVEFLVIHQKPKKTLNEIMKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRIMMTEASNNSVSSSFLLDDDSSIPFTVDDISKSMKQVDTDVDPPSLIRENSGFVFLLQRSE* 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0151 1519 FunFam Myosin heavy chain 242 297 - -
Vvi11g0151 1519 PRINTS Myosin heavy chain signature 472 500 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 PRINTS Myosin heavy chain signature 419 447 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 PRINTS Myosin heavy chain signature 139 164 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 PRINTS Myosin heavy chain signature 186 213 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 PRINTS Myosin heavy chain signature 82 101 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 Gene3D - 429 613 - -
Vvi11g0151 1519 Coils Coil 913 947 - -
Vvi11g0151 1519 ProSiteProfiles IQ motif profile. 727 754 IPR000048 GO:0005515
Vvi11g0151 1519 MobiDBLite consensus disorder prediction 1089 1104 - -
Vvi11g0151 1519 ProSiteProfiles Myosin motor domain profile. 52 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 FunFam unconventional myosin-Va 824 871 - -
Vvi11g0151 1519 Gene3D - 242 300 - -
Vvi11g0151 1519 ProSiteProfiles IQ motif profile. 798 825 IPR000048 GO:0005515
Vvi11g0151 1519 Pfam DIL domain 1339 1442 IPR002710 -
Vvi11g0151 1519 FunFam unconventional myosin-Va 727 775 - -
Vvi11g0151 1519 CDD MYSc_Myo11 66 710 IPR036018 -
Vvi11g0151 1519 FunFam Class V myosin 429 570 - -
Vvi11g0151 1519 MobiDBLite consensus disorder prediction 1084 1104 - -
Vvi11g0151 1519 Gene3D - 775 822 - -
Vvi11g0151 1519 Gene3D - 823 872 - -
Vvi11g0151 1519 Gene3D - 725 774 - -
Vvi11g0151 1519 Gene3D Kinesin motor domain 55 652 IPR036961 -
Vvi11g0151 1519 ProSiteProfiles IQ motif profile. 821 847 IPR000048 GO:0005515
Vvi11g0151 1519 ProSiteProfiles IQ motif profile. 844 873 IPR000048 GO:0005515
Vvi11g0151 1519 SMART MYSc_2a 46 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 Coils Coil 867 901 - -
Vvi11g0151 1519 FunFam Myosin 2 302 416 - -
Vvi11g0151 1519 Gene3D Myosin VI head, motor domain, U50 subdomain 302 591 - -
Vvi11g0151 1519 FunFam unconventional myosin-Va 776 823 - -
Vvi11g0151 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 775 IPR027417 -
Vvi11g0151 1519 PANTHER MYOSIN 45 1451 - -
Vvi11g0151 1519 Gene3D - 657 720 - -
Vvi11g0151 1519 CDD MyosinXI_CBD 1103 1486 IPR037975 GO:0007015
Vvi11g0151 1519 ProSiteProfiles IQ motif profile. 748 777 IPR000048 GO:0005515
Vvi11g0151 1519 FunFam Myosin XI D 657 720 - -
Vvi11g0151 1519 Pfam IQ calmodulin-binding motif 727 745 IPR000048 GO:0005515
Vvi11g0151 1519 Pfam IQ calmodulin-binding motif 749 764 IPR000048 GO:0005515
Vvi11g0151 1519 Pfam IQ calmodulin-binding motif 775 793 IPR000048 GO:0005515
Vvi11g0151 1519 Pfam IQ calmodulin-binding motif 822 842 IPR000048 GO:0005515
Vvi11g0151 1519 ProSiteProfiles Dilute domain profile. 1152 1463 IPR002710 -
Vvi11g0151 1519 SMART iq_5 772 794 IPR000048 GO:0005515
Vvi11g0151 1519 SMART iq_5 843 865 IPR000048 GO:0005515
Vvi11g0151 1519 SMART iq_5 820 842 IPR000048 GO:0005515
Vvi11g0151 1519 SMART iq_5 747 769 IPR000048 GO:0005515
Vvi11g0151 1519 SMART iq_5 724 746 IPR000048 GO:0005515
Vvi11g0151 1519 Coils Coil 986 1041 - -
Vvi11g0151 1519 Pfam Myosin head (motor domain) 54 710 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g0151 1519 SMART DIL_2 1338 1445 IPR002710 -
Vvi11g0151 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 873 IPR027417 -
Vvi11g0151 1519 ProSiteProfiles IQ motif profile. 773 802 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0151 Vvi-Chr11 1355241 1369503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0151 57 1519 Myosins gene family AT5G20490 83.197 0.0 2514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0151 K10357 - vvi:100243893 2837.37