Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi11g0129 | ATGCCACTCATCCCATTCAACCCATCAACCCATCTGCAATCCACACACACCTCTCCAGCTCTCCTCTCTCCGCTAGAGTTGTTTTTGGACTCAATGTCTATGTCTATCAATGGTGTTTCTCCTTCATTTCAGAGCTTTCGGCCTCCCACTCTCCCTCTACCTGTAGAGGAAGAGAACCCCTTCTCCATATTGGGGGAGTCTCGTCATGTACTGGCTCCACCGCACTGGAAGAAGGCTGCTGAGGCCCTACAGTGTGGTCATTTTGATGAGGTGTGCGCCATGGTGTCGCAGTTTGCACATGCGCAAACTGTGGATATTCAGGGCACGGCTCTCACAGTGGCCCAGGTCACTGCTCTTGCACGTGGGGATCATGTTAGGGTCGCTCTCGATGAGGCGGTGGCCCGAGGCCGCGTGACGAGGAGTGCTGATTGGGTGGCTGAGAACATCTCTCGGGGCACGGACACGTACGGGGTGACTACTGGCTTCGGTGCCACTTCCCATCGGCGGACCAACAAGACCGCTGACCTTCAGACCGAGCTGATTCGGTTTCTCAACGCTGGAGTGATCGGGAAGGAGACTCTTCCGGCGAGTTTTTCCAAGGCTGCTATGCTTGTCCGAGCGAATACTCTGATGCAAGGGTATTCGGGTATTCGGTGGGAGATACTTGAGGCCATGGCCAAGCTGATAAACCTCAATTTGATCCCTAAACTGCCTTTGAGGGGGACCATCACTGCTTCTGGGGACCTTGTGCCCTTATCTTATATTGCTGGAGTATTAACTGGGAGGCATAATTCCAAGGTTGTGACGCCTGAGGGGGAAGAAATCACGGCCATGGAAGCTCTGAAGAGAGCTGGCATTGAAGCCCCTTTTCAGCTGCAGGCGAAGGAAGGTCTGGCTCTTGTGAATGGGACTGCTGTTGGGTCAGCGGTGGCCGCAACGGTTTGTTTTGATGCCAACATCTTGGGGCTCCTTGCGGAGGTTCTGTCTGCCTTGTTCTGTGAAGTGATGAATGGCAAGCCTGAGTTTACGGATCCATTGACTCATGAGCTGAAACACCATCCTGGCCAGATTGAATCAGCTGCTATAATGGAATTTCTTCTTGATGAAAGTGACTACATGAAAGCAGCAAAGCTTCGTCAAGAGAAGGATGTGTTGATGAAGCCTAAACAAGACCGGTATGCGCTCAGAACTTCTCCCCAGTGGCTGGGGCCTCAGATTGAGGTGATTCGCATGGCAACACATGCAATTGAGAGGGAAATCAATTCTGTCAACGACAACCCTTTGATCGATGTCTCTCGGGACCTTGCTCTTCATGGAGGGAACTTCCAAGGGACCCCTATTGGTGTTTCCATGGACAATCTCCGGATTGCCATTGCAGCAATTGGGAAGCTCATGTTTGCTCAATTCTCGGAACTGGTCTGTGACTATTATAATGGTGGGTTGCCTTCCAATTTGAGTGGCGGCCCCAACCCGAGCTTGGACTATGGCTTCAAAGGTGCTGAGATAGCCATGGCTGCCTACTGCTCCGAGCTTCAATACCTGGCGAACCCGGTCACAACACACGTGCAGAGCGCTGAACAACACAATCAGGATGTGAATTCTCTGGGATTAATCTCTGCAAGGAAGAGTGCTGAAGCAGTGGAGATCCTAAAGCTCATGTCTGCAACTTACATGGTGGCACTTTGCCAGGCAGTTGACCTGAGACACCTAGAAGAAAACATGAGGGAAGTAGTGAAACATCTCATCACCCAAGTAGCAAGAAAAACCCTTTACACAGATGAAGATGGGACGCTGCTAGAATCTCGTTTCTGCGAGAAAGAACTCCAGCAGGTCGTCGAAAACTTGCCAGTTTTCTCCTATATCGACGATCCCACTAATCCTTCATACACTTTTTTGCCTCAACTCCGAGATGTACTAGTTGAAAGAGCTCTCAAAGACCCCAAATCCACCGACTCTGCGGGCTATTCCATTTTCAAGCGCATCCCCATATTTCAAGAGGAGCTGAAGGAGAGACTGATTGAGGAGATATCAAAAGCAAGAGAAAGGTTTGATAATGGAGATTTCCCAGTACCAAACAGAATCAAGAAATGCAGGACTTACCCCATATACGGATTTGTGAGGAAAGAAGTGGGAACCAAGCTCCTTAGTGGTGAAAACAAGGTGAATGAAGATGGGACGCTGCTAGAATCTCGTTTCTGCGAGAAAGAACTCCAGCAGGTCGTCGAAAACTTGCCAGTCTTCTCCTATATCGACGATCCCACTAATCCTTCATACACTTTTTTGCCTCAACTCCGAGATGTACTAGTTGAAAGAGCTCTCAAAGACCCCAAATCCACCGACTCTGCGGGCTATTCCATTTTCAAGCGCATCCCCATATTTCAAGAGGAGCTGAAGGAGAGACTGATTGAGGAGATATCAAAAGCAAGAGAAAGGTTTGATAATGGAGATTTCCCAATACCGAACAGAATCAAGAAATGCAGGACTTACCCCATATACGGATTTGTGAGGAAAGAAGTGGGAACCAAGCTCCTTAGTGGTGAAAACAAGGTGAGTCCCGGAGAGGATATAGAGAAGGTTTATGAGGCGATCAATGATGGGAAGTTGGGAGATGTGCTGATGAAGTGCTTGTCATTTTGGAGAGGCACGTCGGGGCCTTTCACGCCGAGGCCTAGTGGGTTGTCTTCTCCGGCGCAGTTTAATCCGGAGTATTGGGGTTGGTTTGAGAAGCTGAGGTCTCCTTCTTCAGCTTCGAATGGGAGAGTGAATTGGGACCAGCTCTAA | 2781 | 0.4962 | MPLIPFNPSTHLQSTHTSPALLSPLELFLDSMSMSINGVSPSFQSFRPPTLPLPVEEENPFSILGESRHVLAPPHWKKAAEALQCGHFDEVCAMVSQFAHAQTVDIQGTALTVAQVTALARGDHVRVALDEAVARGRVTRSADWVAENISRGTDTYGVTTGFGATSHRRTNKTADLQTELIRFLNAGVIGKETLPASFSKAAMLVRANTLMQGYSGIRWEILEAMAKLINLNLIPKLPLRGTITASGDLVPLSYIAGVLTGRHNSKVVTPEGEEITAMEALKRAGIEAPFQLQAKEGLALVNGTAVGSAVAATVCFDANILGLLAEVLSALFCEVMNGKPEFTDPLTHELKHHPGQIESAAIMEFLLDESDYMKAAKLRQEKDVLMKPKQDRYALRTSPQWLGPQIEVIRMATHAIEREINSVNDNPLIDVSRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNGGLPSNLSGGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAVEILKLMSATYMVALCQAVDLRHLEENMREVVKHLITQVARKTLYTDEDGTLLESRFCEKELQQVVENLPVFSYIDDPTNPSYTFLPQLRDVLVERALKDPKSTDSAGYSIFKRIPIFQEELKERLIEEISKARERFDNGDFPVPNRIKKCRTYPIYGFVRKEVGTKLLSGENKVNEDGTLLESRFCEKELQQVVENLPVFSYIDDPTNPSYTFLPQLRDVLVERALKDPKSTDSAGYSIFKRIPIFQEELKERLIEEISKARERFDNGDFPIPNRIKKCRTYPIYGFVRKEVGTKLLSGENKVSPGEDIEKVYEAINDGKLGDVLMKCLSFWRGTSGPFTPRPSGLSSPAQFNPEYWGWFEKLRSPSSASNGRVNWDQL* | 927 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi11g0129 | 926 | Gene3D | Fumarase/aspartase (Central domain) | 819 | 889 | - | - | |
| Vvi11g0129 | 926 | PANTHER | HISTIDINE AMMONIA-LYASE | 721 | 886 | IPR001106 | - | |
| Vvi11g0129 | 926 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 241 | 257 | IPR022313 | GO:0016841 | |
| Vvi11g0129 | 926 | Gene3D | - | 571 | 692 | IPR023144 | - | |
| Vvi11g0129 | 926 | Gene3D | Fumarase/aspartase (Central domain) | 305 | 721 | - | - | |
| Vvi11g0129 | 926 | CDD | PAL-HAL | 111 | 568 | IPR001106 | - | |
| Vvi11g0129 | 926 | FunFam | Phenylalanine ammonia-lyase | 65 | 304 | - | - | |
| Vvi11g0129 | 926 | Gene3D | - | 65 | 304 | IPR024083 | - | |
| Vvi11g0129 | 926 | SUPERFAMILY | L-aspartase-like | 73 | 720 | IPR008948 | GO:0003824 | |
| Vvi11g0129 | 926 | NCBIfam | phenylalanine ammonia-lyase | 74 | 720 | IPR005922 | GO:0005737|GO:0006559|GO:0016841 |
Showing 1 to 10 of 12 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi11g0129 | K10775 | - | vvi:100255939 | 1397.49 |
Showing 1 to 1 of 1 entries