Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0128 ATGCTTCTTGATGAATGCATTCACACTTCCCTTTCTCCAAAAGGGTCCATGGGTGTTTACCAAATTTTCTGTTTTTCTTTTTCCTTTTTTATGACCGAGGAGCCTTCCCTGGCAGAGTCCTTGAGACTCCATGGGGATCCAAATCTTTGGGTGTTGATTGCATCCCACCATAACCAACATCGGATAATCCAGGAAATGCAACCAGTTGCAGGAATTAAACACTGGAATCCAATCCACAACCGGCAGGATGTTCACCTAACATTTGACCCAAAGCCCAACTCCATAATCTCACAGATTGAGAACAAATTCCATTCTCTCCTCTCTCCGCTAGAGTTGTTTTTAGACTCAATGTCTATGTCTATCAATGGTGTTTCTCCTTCATTTCAGAGCTTTCGGCCTCCCACTCTCCCTCTACCTGTAGAGGAAGAGAACCCCTTCTCCATATTGGGGGAGTCTCGTCATGTACTGGCTCCACCGCACTGGAAGAAGGCTGCTGAGGCCCTACAGTGTGGTCATTTTGATGAGGTGTGCGGCATGGTGTCGCAGTTTGCACATGCGCAAACTGTGGATATTCAGGGCACGGCTCTCACAGTGGCCCAGGTCACTGCTCTTGCACGTGGGGATCATGTTAGGGTCGCTCTCGATGAGGAGGCGGCCCGAGGCCGCGTGACGAGGAGTGCTGATTGGGTGGCTGAGAACATCTCTCGGGGCACGGACACGTACGGGGTGACTACTGGCTTCGGTGCCACTTCCCATCGGCGGACCAACAAGACCGCTGATCTTCAGACCGAGCTGATTCGGTTTCTCAATGCTGGACTGAAGGAGAGACTGATTGAGGAGATATCAAAAGCAAGAGAAAGGAAACGCCTTTTCAATATGATTAATGATCTTCCAACAATATTTGAGGTTGTGACCGGAGCTGCAAAGAAACAAGTGAAGGAGAAGTCATCAGTTTCAAACCATAGCAGCAACAAATCCAAGTCAAAATCAAAAGTGAGAGGATCTGAATCAGAAAATATTCAAAGGTTGGGCAGCCAAAGGATGAGGAAGAAGGTTTGGATGAGGTAG 1068 0.4822 MLLDECIHTSLSPKGSMGVYQIFCFSFSFFMTEEPSLAESLRLHGDPNLWVLIASHHNQHRIIQEMQPVAGIKHWNPIHNRQDVHLTFDPKPNSIISQIENKFHSLLSPLELFLDSMSMSINGVSPSFQSFRPPTLPLPVEEENPFSILGESRHVLAPPHWKKAAEALQCGHFDEVCGMVSQFAHAQTVDIQGTALTVAQVTALARGDHVRVALDEEAARGRVTRSADWVAENISRGTDTYGVTTGFGATSHRRTNKTADLQTELIRFLNAGLKERLIEEISKARERKRLFNMINDLPTIFEVVTGAAKKQVKEKSSVSNHSSNKSKSKSKVRGSESENIQRLGSQRMRKKVWMR* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0128 355 PANTHER HISTIDINE AMMONIA-LYASE 157 285 IPR001106 -
Vvi11g0128 355 MobiDBLite consensus disorder prediction 312 355 - -
Vvi11g0128 355 Pfam Aromatic amino acid lyase 196 284 IPR001106 -
Vvi11g0128 355 Gene3D - 150 297 IPR024083 -
Vvi11g0128 355 SUPERFAMILY L-aspartase-like 158 284 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0128 Vvi-Chr11 1199154 1204532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0128 158 273 Monolignol Biosynthesis Gene Families AT3G10340 51.724 6.62e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0128 K10775 - vvi:100266224 332.413