Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0107 ATGATACCAGCATTTACGACAAGTTGTAGCATGTTGATAGAGCGATGGAAGGAGTTGGCTAGTCTTCAAGAAACTTGTGAAGTGGATATCTGGCCCGAACTTCAGAATCTTACCAGGGATGTTATTTCTCGGGCAGCATTAGGAAGCAGCTTTGAAGAAGGAAGGCAAATCTTTGAACTTCAAAAGGAACATATAACCCTAACTCTTGAAGCCATGCAAACATTGTACATCCCTGGTTTCAGGTTTATTCCAACAAAGAAAAACCAGAGAAGAAAGTACTTGCAGAAAAGGACCACATCAATGTTTAGAGATCTGATCCAAAGGAAAAAGGATGCTATAAGAACAGGACAAGCCGAGGGTGACAACTTACTAGGCTTGCTCTTGCTGTCTAGTAGCCAGAACAATTTGCCTGAAAATGTGATGAGCACAAAAGATAATGCGATAACTCTTGAGGAGGTGATAGAGGAATGCAAGCAGTTCTACCTTGCTGGCCATGAAACAACCTCCAGTTGGTTAACATGGACAGTGACAGTTCTAGCTATGCACCCAAATTGGCAAGAGAAGGCAAGAGAAGAAGTAATGCAAATTTGTGGTAAAAAGGAACCTGATTCAGAAGCTCTAAGCCACCTCAAGATTGTAAGCATGATCCTTTATGAAGTTCTAAGGTTATATCCACCTGTAATTGCTGTTTATCAACATGCTTACAAAGAAACCAAGATAGGCACTATCTCTCTTCCAGCTGGAGTTGATCTTACACTACCTACACTACTTATCCATCATGATCCTGAACTTTGGGGTGACGATGCAGAAGAATTTAAACCAGAGAGATTTGCTGAAGGAGTTTCAAAGGCATCTAAGGATCAACTCGCATTCTTCCCATTTGGATGGGGGCCAAGGACCTGTATTGGCCAAAATTTTGCCATGATAGAAGCTAAGGTTGCTTTGGCTATGATCCTACAACATTTCTCATTCGAGCTCTCGCCTTCCTACACTCATGCTCCTCATACTGTTATGACTCTACAACCACAACATGGAGCCCAACTTAAATTTTACCAACTCTAA 1062 0.4162 MIPAFTTSCSMLIERWKELASLQETCEVDIWPELQNLTRDVISRAALGSSFEEGRQIFELQKEHITLTLEAMQTLYIPGFRFIPTKKNQRRKYLQKRTTSMFRDLIQRKKDAIRTGQAEGDNLLGLLLLSSSQNNLPENVMSTKDNAITLEEVIEECKQFYLAGHETTSSWLTWTVTVLAMHPNWQEKAREEVMQICGKKEPDSEALSHLKIVSMILYEVLRLYPPVIAVYQHAYKETKIGTISLPAGVDLTLPTLLIHHDPELWGDDAEEFKPERFAEGVSKASKDQLAFFPFGWGPRTCIGQNFAMIEAKVALAMILQHFSFELSPSYTHAPHTVMTLQPQHGAQLKFYQL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0107 353 PRINTS E-class P450 group I signature 152 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS E-class P450 group I signature 255 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS E-class P450 group I signature 291 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS E-class P450 group I signature 172 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS E-class P450 group I signature 301 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 346 - -
Vvi11g0107 353 SUPERFAMILY Cytochrome P450 1 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS P450 superfamily signature 292 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS P450 superfamily signature 163 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 PRINTS P450 superfamily signature 215 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 Pfam Cytochrome P450 2 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0107 353 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 294 303 IPR017972 GO:0005506|GO:0016705
Vvi11g0107 353 Gene3D Cytochrome P450 1 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0107 Vvi-Chr11 1037048 1038691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0107 1 353 Cytochrome P450 AT3G14680 51.695 1.24e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0107 - - qsu:111985506 533.102