Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0094 ATGGTCCCTCGACATGGAATTGTATTGCCATTGATGGGGATGTGCACAAGCAGAAGAGTCATCAAATCAAACATTGTCTTGCTATGTGAGAGCCCACACAACCTAGCCGTTGTAGCCTCCAACGGCCAAATCTCCACCCATTTAAATTCAAAACACTCCATATCCTTCAGGGCAGTTCAACATCAATTTCAGAAGTTCCCAATCCAAATGGGTTCCTCTAAGTTCAGAACCCCTTGTTCTTTCCTGAATCTTCTTCTCTCTTGTTTGAATTTCATTCTCTTTATCCTCTCTTCAGCCTCTCTTGCACCCACCATCCTCCTCAGAATGCCCCCAACTTCACTGGGCTGGGCGTTTCTCATGATCTCATGCATCTCACTCTTCTCCTCCTTTGTTGGTTTTTACTCTCAGCTCACACACTTCTGCTTCATAACCCATGTTTCACTTCTGCTCTCCTCTTCCATAGGCCAACTGCTGGGCATTTTGGCCTTGTTTACCAGAGAGAATTCGAGCCTCTCCATGCTGAAATCGCCTCGGGACATGAAGGAGGCTAAGCTTTTAGTGAGGTTGGAATGTGGGATTTTAATGGCAATGTTTGTAATGCAAGTGGGGGTGTTGATATTGACTTGTATTATTCACAGCTGTTGGGTAAGAGAGTATGAGGGGTTGGAGGCCGAGAGAGAGGCAGCGGCGAGGAAGAGGAGTAGGAGGATTGCGCGTGTGCAGGAGGAGTCCATGGCAAATGCAGCAAAAATTGCAGAGGTAAAAGCCAAGGAGTTTGATGAGAAGATGAAAAACAAGTATGGGCAGGCAATGGATTCTAACTCCTCAACAAGGAAGAAGGAAGAATTCTCAATAGAGATTCAGGCACCATCTGTTCCTCAGTTTAGAACAGAAAGGCCATCCAATCTCCAATTTGACCAGCTGCAGCCGTCAGATGAAGAATTCAATGAAGGGAGCAGGGCTGAGTTTGGACCATTCATGGCACGAGCGGCTGTGCTGGATGAAGAATACTGGACAGCAGCATGGCTGCGAGCAGAAAGTCACTGGGAGGGTAGACCAAATGAAAGATATGCTGAAAACTACAAAAGGAAATTTGCAGAGCAGGAGTTCAATGCATTAAAAAGACGATGCAGAGGACAAAATGACCAGAAATACACCTGCATTGTGGCAGTAAAGAAGGAAGAGAGGGGTGTAAAACAAACAGTACTGAAAAGTGTAGTAGGAACCCTCGATTTGAGCATCCGATATTTGTTGAATGGAGATACCTTTCCAGGGGAACAGGTTAAGGCTCCTCTTTTCTGCAGCATCAACAGAACTAGATCAAGCAAATATGGTTATGTTGCAAACTTATGTGTTGCCAAATCAGTGCGCCGCCAGGGCATTGCAAGCAATATGTTGCATTTTGCTGTTGAATCAGCCAAATCAATTGGTGTAGAACAGGTATTTGTGCATGTGCATAGAAATAATGGACCTGCACAAGAACTGTACCAAAAAATGGGCTTTGAGATGGTGGAAGTGGCAAGCTCTCAACTGTTACAGGAGCAAACCTACTTGCTTTGCTTCAGGACATAG 1572 0.4523 MVPRHGIVLPLMGMCTSRRVIKSNIVLLCESPHNLAVVASNGQISTHLNSKHSISFRAVQHQFQKFPIQMGSSKFRTPCSFLNLLLSCLNFILFILSSASLAPTILLRMPPTSLGWAFLMISCISLFSSFVGFYSQLTHFCFITHVSLLLSSSIGQLLGILALFTRENSSLSMLKSPRDMKEAKLLVRLECGILMAMFVMQVGVLILTCIIHSCWVREYEGLEAEREAAARKRSRRIARVQEESMANAAKIAEVKAKEFDEKMKNKYGQAMDSNSSTRKKEEFSIEIQAPSVPQFRTERPSNLQFDQLQPSDEEFNEGSRAEFGPFMARAAVLDEEYWTAAWLRAESHWEGRPNERYAENYKRKFAEQEFNALKRRCRGQNDQKYTCIVAVKKEERGVKQTVLKSVVGTLDLSIRYLLNGDTFPGEQVKAPLFCSINRTRSSKYGYVANLCVAKSVRRQGIASNMLHFAVESAKSIGVEQVFVHVHRNNGPAQELYQKMGFEMVEVASSQLLQEQTYLLCFRT* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0094 523 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 433 523 IPR000182 GO:0016747
Vvi11g0094 523 Pfam Acetyltransferase (GNAT) family 381 501 IPR000182 GO:0016747
Vvi11g0094 523 Coils Coil 363 383 - -
Vvi11g0094 523 CDD NAT_SF 433 484 - -
Vvi11g0094 523 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 231 522 - -
Vvi11g0094 523 Gene3D - 327 512 - -
Vvi11g0094 523 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 341 505 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0094 Vvi-Chr11 928669 934387 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi11g0094 Acetyltransf_1 4.7e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0094 - - vvi:100254310 512.686