Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g0084 | ATGGCAGTGAAGAAGATCACGTGGAGATCGGTTTTCCCGGCATGTTACGGGTCGGAAAAGATGGCGTCCAAGCGGAGGAAGGCGGCAGTGGTGGCGAAGCAGACCTCGTTTCAGAGGATTTCGATATCGGATTTGAGTAATCCGGGGTCGACGCTGTCTGAGGATCTGTCCACCTCTCTGATGGGGTCAAACCTTCATGTGTTCACGCTGACTGAGCTGAAGGTGATCTGCCAGAACTTCTCCTCCAACAACTTCATCGGAGAAGGCGGGTTCGGCCCCGTCCACAAGGGCTTCATTGATGACAAGCTCCGCCCTGGTTTGAAGGCTCAGCCCGTGGCTGTCAAGCTTTTGGATTTGGAAGGCTTGCAGGGCCATCGAGAATGGCTGACAGAAGTGATTTTTCTCGGGCAACTGAGGCACCCGCATCTTGTCAAGCTGATCGGGTATTGTTGCGAGGACGAGCACAGGCTCCTGGTATACGAATACATGCCGCGAGGAAGCTTGGAGAATCAGCTCTTCAGAAGGTACTCTGTTTCTCTTCCATGGTCCACAAGAATGAAAATTGCACTTGGGGCTGCAAAGGGTTTAGCTTTCCTCCATGAAGCGGAGAAACCTGTTATATATCGAGATTTTAAGGCTTCAAACATCTTGTTGGACTCTGATCATACTCCCAAATTATCAGATTTTGGTCTAGCCAAGGACGGCCCTGAAGGTGATGACACACATGTTTCAACCCGAGTAATGGGGACACAAGGGTATGCTGCTCCAGAGTACATTATGACAGGGCATTTGACAGCAATGAGCGATGTTTACAGCTTTGGAGTGGTGCTCTTAGAGCTACTAACTGGGAGAAGATCAGTGGATAAGACCCGGCCTAACAGGGAGCAGAACCTAGCAGAGTGGGCTAGGCCACAACTGAACGATTCCAGGAAGCTTGCCCGCATAATGGATCCAAGACTTGAAGGTCAATACTCAGAAGCAGGGGCTCAGAGCGCTGCTGCATTGGCTTACCAGTGCCTGAGCCACAGGCCAAAGCATAGGCCAACAATGAGCACTGTGGTTAAGACCCTGGAGCCTCTCCAGGACTACAATGAAATTCCAGTTGGGACCTTTGTTTACACTGTCCCAAGCGAAAATGACTTGCCTAAGGAGGAGACGAAGGAAGGAGGAGAAGCACAGAAGGAACCCAAAAAAGAAAGTTCCCATCAAGGCCATAGGCATAGGATGAGATCACCAAAATCCCCAACCATTTATTCAGAAACCGCTCTACGCCAGAACCTCAGAAACAGTCCAAACTCTCCCCTGCATCCCAGGAGCAGGGGAAGTTAG | 1329 | 0.5071 | MAVKKITWRSVFPACYGSEKMASKRRKAAVVAKQTSFQRISISDLSNPGSTLSEDLSTSLMGSNLHVFTLTELKVICQNFSSNNFIGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHEAEKPVIYRDFKASNILLDSDHTPKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKTRPNREQNLAEWARPQLNDSRKLARIMDPRLEGQYSEAGAQSAAALAYQCLSHRPKHRPTMSTVVKTLEPLQDYNEIPVGTFVYTVPSENDLPKEETKEGGEAQKEPKKESSHQGHRHRMRSPKSPTIYSETALRQNLRNSPNSPLHPRSRGS* | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g0084 | 442 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 206 | 218 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g0084 | 442 | FunFam | Serine/threonine-protein kinase BIK1 | 47 | 162 | - | - | |
Vvi11g0084 | 442 | MobiDBLite | consensus disorder prediction | 374 | 442 | - | - | |
Vvi11g0084 | 442 | Pfam | Protein tyrosine and serine/threonine kinase | 84 | 357 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi11g0084 | 442 | ProSiteProfiles | Protein kinase domain profile. | 80 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0084 | 442 | PANTHER | OS01G0588500 PROTEIN-RELATED | 45 | 361 | - | - | |
Vvi11g0084 | 442 | MobiDBLite | consensus disorder prediction | 380 | 402 | - | - | |
Vvi11g0084 | 442 | CDD | STKc_IRAK | 86 | 360 | - | - | |
Vvi11g0084 | 442 | MobiDBLite | consensus disorder prediction | 414 | 442 | - | - | |
Vvi11g0084 | 442 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 369 | - | - | |
Vvi11g0084 | 442 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 162 | - | - | |
Vvi11g0084 | 442 | SUPERFAMILY | Protein kinase-like (PK-like) | 55 | 358 | IPR011009 | - | |
Vvi11g0084 | 442 | FunFam | Probable serine/threonine-protein kinase PBL8 | 163 | 375 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi11g0084 | Vvi-Chr11 | 867815 | 869712 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi11g0084 | 66 | 383 | Glycoside Hydrolase | AT3G07070 | 51.713 | 4.36e-101 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Vvi11g0084 | PK_Tyr_Ser-Thr | 6.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g0084 | - | - | vvi:100257697 | 863.218 |