Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0083 ATGGAGGCTCCTTCTTGTGTAGTTTTGGCCCTGGTGTGGCTAGCTGCAGCAGCCCTTCTCTCAAAACTTTTCAGTTTCCGGCCAGCCCACAAGCAAAACCTTCCACCAGGCCCCAAACCATGGCGGATCATCGGCAACCTAAACCTCATTGGCCATCTCCCCCACCTGTCCCTCCACAAACTGTCCCAAAAATATGGACAAATAATGCAGCTTCAATTCGGGTCCTTCCCAGTTGTAGTGGCCTCGTCTCCAGAAATGGCAAGGCAGTTCTTAAAGACAAATGATCACCTCTTTGCCTCTAGGCCTCAGACTGCTGCTGGCAAGTACACTGCTTATAACTACTCCAACATCACCTGGGCACCTTACGGTCCATGCTGGCGCCAGGGGCGTAAAATCTTCCACACAGAGCTGTTCAGCTGGAAAAGGCTCGAGTCTTGTGAATATATTCGGGTCGAAGAAAGGCGGGCTTTCGTCTCCCGCCTCTATGCGTTGTCAGGAAAGCCAGTCATGCTTAAAGACCATCTCTCTCGCGTTACTCTCAGCGTTATAAGCAGAATTGTACTGGGGGAGAAGTACTTCAATGAGTCTGAATCCGGGAGGTCAATAGTGACGGTGGAAGAGTTCCAGGAGATGCTGGATGAGTTGTTCTTGCTTAATGGTGTGTTGAATATTGGGGATTGGATACCTTGGATTGCATTCTTGGACTTGCAAGGGTATGTGAAGAGGATGAAGGCCTTGCGTGATAAATTTGATAGGCTTTTTGATCATGTGATTGAGAAACACAGGGCCAGAAGAGAAGCAGCGGACTTTGTGGCTAAGGATATGGTGGATATGCTTCTGAGATTGGCTGATGATCCTGATCTTGAGGTTAAGCTCGGTACTGATGGGGTCAAAGGGCTTACCCTGGACCTGCTTGCTGGTGGTACAGATACCTCAGCTACTACTATGGAATGGGCAATGTCTGAGATCTTGAGGCAGCCAAGCATAGCTACGAAGGCAACTGAAGAGCTGGATAGAGTCATAGGGAGAGACAGATGGGTGGAAGAGAAAGACATCCCCCAACTTCCTTACATAGATGCAATTGTGAAGGAGACAATGAGGCTACACCCTGTTGCTGTCCTGCTTGCCCCTCACCTGGCTCTTCAAGACTGCAATGTATCTGGCTATGATATTCGCAAAGGAACCCGAGTCCTAGTAAACGCATGGAGCATAGGGAGGGACCCCAACATATGGGATGCACCGGAGGAATTTCGCCCAGAGAGGTTCCTAGGGAAGGCAATTGATGTGAACGGGCAAAACTTTGAGCTACTACCATTTGGTTCAGGGCGGAGGATGTGTGTTGGATACAGGCTTGGCCTAAAGATGATTCAATCAAGCTTGTCTAACATGTTGCATGGATTCCACTGGAAATTGCCTGGGGATATGAAGACAGAAGAGCTGAACATGGAGGAAGTGTTTGGCCTTACAACTCCAAGGAAGGTCCCACTTGTTGCTGTCATGGAGCCTAGACTCCCAAGTCATCTGTATTAG 1530 0.4908 MEAPSCVVLALVWLAAAALLSKLFSFRPAHKQNLPPGPKPWRIIGNLNLIGHLPHLSLHKLSQKYGQIMQLQFGSFPVVVASSPEMARQFLKTNDHLFASRPQTAAGKYTAYNYSNITWAPYGPCWRQGRKIFHTELFSWKRLESCEYIRVEERRAFVSRLYALSGKPVMLKDHLSRVTLSVISRIVLGEKYFNESESGRSIVTVEEFQEMLDELFLLNGVLNIGDWIPWIAFLDLQGYVKRMKALRDKFDRLFDHVIEKHRARREAADFVAKDMVDMLLRLADDPDLEVKLGTDGVKGLTLDLLAGGTDTSATTMEWAMSEILRQPSIATKATEELDRVIGRDRWVEEKDIPQLPYIDAIVKETMRLHPVAVLLAPHLALQDCNVSGYDIRKGTRVLVNAWSIGRDPNIWDAPEEFRPERFLGKAIDVNGQNFELLPFGSGRRMCVGYRLGLKMIQSSLSNMLHGFHWKLPGDMKTEELNMEEVFGLTTPRKVPLVAVMEPRLPSHLY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0083 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PANTHER CYTOCHROME P450 98A9 8 509 - -
Vvi11g0083 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vvi11g0083 509 FunFam Cytochrome P450 84A1 27 504 - -
Vvi11g0083 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 CDD CYP71_clan 66 496 - -
Vvi11g0083 509 SUPERFAMILY Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0083 509 Gene3D Cytochrome P450 28 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0083 Vvi-Chr11 865734 867363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0083 5 509 Cytochrome P450 AT5G07990 41.910 1.92e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0083 - - vvi:100262821 992.26