Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0082 ATGTCCGAGGTCTTGAGGCAGCCAAACATAGCTAACAAGGCAACCGAAGAGCTGGATAGAGTTATAGGGAGAAATAGATGGGTGGAAGAGAAAGACATTCCCCAACTTCCTTACATAGATGCAATTGTGAAGGAGACAATGAGGCTACACCCTGTTGCTGTCCTGCTTGCCCCTCACCTGGCTCTTCAGGACTGCCATGTAGCTGGCTATGATATTCGCAAAGGAACCCGAGTCCTAATAAACACATGGAGCATAGGGCGGGACCCCAATCTATGGGATGCACCTGAGGAATTTTTCCCAGAGAGGTTCCTAGGGAAGGCAATTGATGTAAAGGGGCAAAACTTTGAGCTACTGCCATTTGGTTCAGGGCGGAGGATGTGTCCTGGCTACAGCCTTGCCCTAAAGATGATTGGATCCAGCTTGGCTAACATGTTGCATGGATTCCACTGGAAATTGCCTGGAGATATGAAGCCAGAAGAGCTGAACATTGAGGAAGTGTTTGGACTGACAACTCCAAGGAAGGTCCCACTTGTTGCTTTCATGGAGCCTAGACTCCCAAGTCATCTTTACTAG 573 0.4852 MSEVLRQPNIANKATEELDRVIGRNRWVEEKDIPQLPYIDAIVKETMRLHPVAVLLAPHLALQDCHVAGYDIRKGTRVLINTWSIGRDPNLWDAPEEFFPERFLGKAIDVKGQNFELLPFGSGRRMCPGYSLALKMIGSSLANMLHGFHWKLPGDMKPEELNIEEVFGLTTPRKVPLVAFMEPRLPSHLY* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0082 190 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Vvi11g0082 190 FunFam Predicted protein 1 179 - -
Vvi11g0082 190 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 Gene3D Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 SUPERFAMILY Cytochrome P450 2 184 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0082 190 PANTHER CYTOCHROME P450 98A9 1 190 - -
Vvi11g0082 190 Pfam Cytochrome P450 3 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0082 Vvi-Chr11 861972 862544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0082 1 190 Cytochrome P450 AT5G07990 50.000 2.61e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0082 - - vvi:100250788 362.459