Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0080 ATGGAGGCTCCTTCTTGGGTTGTTTTGGCCCTAGCATGGCTAGCCTCAGTAGCCCTTCTCTCAAAAGTTTTCAGTTTCCGGCCACCCCACAAGCAAAACCTTCCACCAGGTCCCACACCATGGCCGATCATCGGCAACCTAAACCTCATTGGCCATCTCCCCCACCGGTCCCTCCACAAACTGTCCCAAAAATATGGACAAATAATGGAGCTTCGATTTGGGTCTTTCCCAGTTGTAGTGGCCTCATCTTCAGAAATGGCAAAGCAGTTCTTAAAGACAAACGATCACCTCTTTGCCTCCAGGCCTCACACTGCTGCCGGCAAGTACATTACTTATAACTACTCCAACATCACCTGGGCTCCTTACGGTCCATACTGGCGCCAAGGGCGTAAAATCTTCCTCACAGAGCTGTTCAGCTCGAAAAGGCTCGCGTCTTATGAGTACATTCGGGTTGAAGAAAGGCAGGCTTTCATCTCCCGCCTCTACGCATTGTCAGGAAAGCCAGTCATGCTTAAAGAACATCTCTCTCGCGTTACTCTCGGCGTTATAAGCAGAATTGTACTGGGGGAGAAGTACTTCAGTGAGTTCGAATCCGGGAGGTCGATGTTGACGGTGGAAGAGTGTCAGAAGATGCTGGGTGAGTTGTTCTTGCTTAATGGTGTGTTGAATATTGGGGATTGGATACCGTGGATTGCATTCTTGGACTTGCAGGGGTATGTGAAGAGGATGAAGGCTTTGCGCGATAAATTTGATAGGTTTTATGATCATGTGCTTGAGAAACACAGGGCCAGAAGAGAAGCAGAGGACTTTGTGGCTAAGGACATGGTGGATATGCTTCTGAGATTGGCTGATGATCCTGATGTTGAGGTTAAGCTCACTACTGATGGGATCAAAGGGTTTACACAGGACCTAATAGCTGGTGGTACAGATACCTCAGCTACTACTCTGGAATGGGCGATGTCCGAGGTCTTGAGGCAGCCAAACATAGCTAAAAAGGCAACTGAAGAGCTGGATAGAGTTATAGGGAGAGATAGATGGGTGGAGGAGAAAGACATTGCCCAACTTCCTTACATAGATGCAATTGTGAAGGAGACAATGAGGCTACACCCTATTGTTGTCCTGCTGGCACCTCACCTGGCTCTTCAAGATTGCAATGTAGCTGGCTATGATATTCGCAGAGGAACCCGAGTCCTAGTAAACACATGGAGCATAGGGAGGGACCCCAACATATGGGATGCACCCGAGGAATTTCGACCAGAGAGGTTCCTAGGGAAGGCAATTGATGTGAAGGGACAAAGCTTTGAGCTGCTGCCATTTGGTTCAGGGCGGAGGATGTGCCCTGGATACAGCCTTGGCCTAAAGATGATTCAATCGAGCTTGGCTAACATGTTGCATGGATTCCACTGGAAATTGCCTTGGGATATGAAGACAGAAGAGCTGAACATGGAGGAAGTTTTTGGACTGACAACTCCAAGGAAGGTCCCACTTGTTGCTGTCATGGAGCCTAGACTCCAAAACCATCTTTACTAG 1530 0.485 MEAPSWVVLALAWLASVALLSKVFSFRPPHKQNLPPGPTPWPIIGNLNLIGHLPHRSLHKLSQKYGQIMELRFGSFPVVVASSSEMAKQFLKTNDHLFASRPHTAAGKYITYNYSNITWAPYGPYWRQGRKIFLTELFSSKRLASYEYIRVEERQAFISRLYALSGKPVMLKEHLSRVTLGVISRIVLGEKYFSEFESGRSMLTVEECQKMLGELFLLNGVLNIGDWIPWIAFLDLQGYVKRMKALRDKFDRFYDHVLEKHRARREAEDFVAKDMVDMLLRLADDPDVEVKLTTDGIKGFTQDLIAGGTDTSATTLEWAMSEVLRQPNIAKKATEELDRVIGRDRWVEEKDIAQLPYIDAIVKETMRLHPIVVLLAPHLALQDCNVAGYDIRRGTRVLVNTWSIGRDPNIWDAPEEFRPERFLGKAIDVKGQSFELLPFGSGRRMCPGYSLGLKMIQSSLANMLHGFHWKLPWDMKTEELNMEEVFGLTTPRKVPLVAVMEPRLQNHLY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0080 509 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vvi11g0080 509 FunFam Cytochrome P450 84A1 27 504 - -
Vvi11g0080 509 ProSitePatterns Lipoxygenases iron-binding region signature 2. 368 378 IPR020834 GO:0016702|GO:0046872
Vvi11g0080 509 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 Gene3D Cytochrome P450 29 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0080 509 CDD CYP71_clan 66 496 - -
Vvi11g0080 509 PANTHER CYTOCHROME P450 98A9 8 509 - -
Vvi11g0080 509 SUPERFAMILY Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0080 Vvi-Chr11 856265 857896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0080 19 509 Cytochrome P450 AT5G07990 43.487 5.62e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0080 - - vvi:100254375 1024.62