Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0078 ATGGTAGTGGCCTTGTCTTCAGAAATGGCAAGGCAGTTCTTAAAGACAAATTATCACCTCTTTGCCTCTAGGCCTCAGACTGCTGCTGGCAAGTACACTGCTTATAACTATTCCAACATCATCTGGGCACCTTTCGGTCCATATTGGCGTCAGGAGAGTAAAATCTACCACACAGAGCTGTTCAACTGGAAAAAGCTCGAGTCTTATGAATATATTGGGGTCGAAGGAAGGTGGGCTTTCATCTCCCACCTCTATGCGTTGTCAGGAAAGCCAGTCATGCTTAAAGACCATCTCTCTCGCGTTACTCTCGGCGTTATAAGCAGAATTGTACTGCGGGAGAAGTATTCAATGAGTCTGAATCCGGGAGGTCAATAG 375 0.4613 MVVALSSEMARQFLKTNYHLFASRPQTAAGKYTAYNYSNIIWAPFGPYWRQESKIYHTELFNWKKLESYEYIGVEGRWAFISHLYALSGKPVMLKDHLSRVTLGVISRIVLREKYSMSLNPGGQ* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0078 124 Pfam Cytochrome P450 1 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0078 124 Gene3D Cytochrome P450 1 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0078 124 PANTHER CYTOCHROME P450 98A9 1 117 - -
Vvi11g0078 124 SUPERFAMILY Cytochrome P450 1 116 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0078 Vvi-Chr11 849939 850313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0078 1 108 Cytochrome P450 AT5G07990 35.185 1.54e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0078 - - vvi:100250788 197.208