Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0077 ATGGGTTCAATATGTGGTATCCACCAGCTTAATTGCTCACAAATAATCCCCCATTCCTCAAACTTTCACCACCCACAACCACCACCACCACCACCACCAATGGAGGCTCCTTGTGTTGTTTTGGCCCTAGTGTGGCTAGCTGCAGCAGCCCTTCTCTCAAAACTTTTCAGTTTCCGGCCACCCCACAAGCAAAACCTTCCACCAGGCCCCAAACCATGGCCGATCATCGGCAACCTAAATCTCATTGGCCATCTCCCCCACCTGTCCCTCCACAAACTGTCCCAAAAATATGGACAAATAATGCAGCTTCAATTCGGGTCTTTCCCAGTTGTAGTGGCCTCGTCTCCTGAAATGGCAAAGCAGTTCTTAAAGACAAACGATCACCTCTTTGCCTCTAGGCCTCAGACTGCTGCTGGCAAGTACACTGCTTATAACTACTCCAACATCACCTGGGCACCTTACGGTCCATACTGGCGCCAGGGGCGTAAAATCTACCACACAGAGCTGTTCAGTTGGAAAAGGCTCGAGTCTTATGAATATATTCAGGTCGAAGAAAGGCGGGCTTTCATCTCCCGTCTCTATGCATTGTCAGGAAAGCCAGTCATGCTTAAAGAACATCTCTCTCGCGTTACTCTCAGCGTTATAAGTAGAATTGTACTGGGGGAGAAGTACTTCAATGAGTCTGAATCCGGGAGGTCAATAGTCACGGTGAAAGAGTTCCAGGAGATGCTGGATGAGTTGTTCTTGCTTAATGGTGTGTTGAATATTGGGGATTGGATACCGTGGATTGCGTTCTTGGACTTGCAGGGGTATGTGAAGAGGATGAAGGTTTTGCGTGATAAATTTGACCGGTTTCATGATCATGTGCTTGAGAAACACAGGGCCAGGAGAGAAGTAGGGGACTTTGTGGTTAAGGATATGGTGGATATGCTTCTGAGATTGGCTGATGATCCCGATCTTCAAGTTAAGCTCACTACTGATGGGATCAAAGGGTTTACACAGGACCTAATAGCTGGTGGTACAGATACCTCAGCTACTACTCTGGAATGGGCGATGTCCGAGGTCTTGAGGCAGCCAAACATAGCTAACAAGGCAACCGAAGAGCTGGATAGAGTTATAGGGAGAAATAGATGGGTGGAAGAGAAAGACATTCCCCAACTTCCTTACATAGATGCAATTGTGAAGGAGACAATGAGGCTACACCCTGTTGCTGTCCTGCTTGCCCCTCACCTGGCTCTTCATGACTGCAATGTAGCTGGCTATGATATTCGCAAAGGAACCCGAGTCCTAATAAACACATGGAGCATAGGGCGGGACCCCAATCTATGGGATGCACCTGAGGAATTTCGCCCAGAGAGGTTCCTAGGGAAGGCAATTGATGTGAAGGGGCAAAACTTCGAGCTGCTGCCATTTGGTTCAGGGCGGAGGATGTGTCCTGGCTACAGCCTTGGCCTAAAGATGATTCGATCCAGCTTGGCTAACATGTTGCATGGATTCCACTGGAAATTGCCTGGGGATATGAAGGCAGAAGAGCTGAACATGGAGGAAGTTTTTGGACTGGCAACTCCAAGGAAGGTCCCACTTGTTGCTGTCATGGAGCCTAGACTCCCAAGTCATCTTTACTAG 1626 0.4846 MGSICGIHQLNCSQIIPHSSNFHHPQPPPPPPPMEAPCVVLALVWLAAAALLSKLFSFRPPHKQNLPPGPKPWPIIGNLNLIGHLPHLSLHKLSQKYGQIMQLQFGSFPVVVASSPEMAKQFLKTNDHLFASRPQTAAGKYTAYNYSNITWAPYGPYWRQGRKIYHTELFSWKRLESYEYIQVEERRAFISRLYALSGKPVMLKEHLSRVTLSVISRIVLGEKYFNESESGRSIVTVKEFQEMLDELFLLNGVLNIGDWIPWIAFLDLQGYVKRMKVLRDKFDRFHDHVLEKHRARREVGDFVVKDMVDMLLRLADDPDLQVKLTTDGIKGFTQDLIAGGTDTSATTLEWAMSEVLRQPNIANKATEELDRVIGRNRWVEEKDIPQLPYIDAIVKETMRLHPVAVLLAPHLALHDCNVAGYDIRKGTRVLINTWSIGRDPNLWDAPEEFRPERFLGKAIDVKGQNFELLPFGSGRRMCPGYSLGLKMIRSSLANMLHGFHWKLPGDMKAEELNMEEVFGLATPRKVPLVAVMEPRLPSHLY* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0077 541 Gene3D Cytochrome P450 61 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 118 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 FunFam Cytochrome P450 84A1 59 536 - -
Vvi11g0077 541 Pfam Cytochrome P450 67 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PANTHER CYTOCHROME P450 98A9 40 541 - -
Vvi11g0077 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Vvi11g0077 541 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 SUPERFAMILY Cytochrome P450 67 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0077 541 CDD CYP71_clan 98 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0077 Vvi-Chr11 833818 835545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0077 38 541 Cytochrome P450 AT5G07990 41.992 8.81e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0077 - - vvi:100250788 1003.43