Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0071 ATGATGCACATGACTCTGTACTGGGGCACGCAGGTGACCCTCCTCTTCTCCTCCTGGAAGACCGATTCATGGCCGAGTTACGCCCTCTCTTTACTCGCCTGCTTCCTCTTCTCCGTCTTCTACCAGAACATGGAAGACCGGCGGCTCAGATTCAAGACTCTCGCCTCCACCCCCGCCGCCGCGCCGCCCTCGCAGTCGGCTGCCACTTTTCTCCTATTCAAACTCGGACGCGGCCGCACCCGCTGGGGCAACCCGTCAAGGATCGCTGAGGCGGTTCTGTTCGGAGTGAACTCGGCGATCGGATACTTGCTTATGCTGGCGATCATGTCGTTTAACGGAGGTGTGTTCGTGGCCATTGTTTTGGGGCTTTCGGTTGGGTACTACTTGTTCAGGAACGGAGATCAGGAAGAGGTGGTGGAGGTGGAGAACTCGTGTGCCTGTTCCTGA 447 0.5794 MMHMTLYWGTQVTLLFSSWKTDSWPSYALSLLACFLFSVFYQNMEDRRLRFKTLASTPAAAPPSQSAATFLLFKLGRGRTRWGNPSRIAEAVLFGVNSAIGYLLMLAIMSFNGGVFVAIVLGLSVGYYLFRNGDQEEVVEVENSCACS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0071 148 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 138 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi11g0071 148 Pfam Ctr copper transporter family 4 130 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0071 Vvi-Chr11 803065 803511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0071 1 148 Inorganic Solute Cotransporters AT5G20650 52.027 5.69e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0071 K14686 - vvi:100247516 283.878