Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0070 ATGACAGAGTCTAGAGGCGCTTACCGCACTAGACATTCTCGATTTCGTGGAGCTTTTAATGGAATTTGTGCTTTGGTTATGTTTCTGTTCTTGTTCTTTAACCGGAGCGATTTTATGGCAAAATCGTTCGTGGTGAATTCGCCTTCGGTTCTCCATCCTCAGTGGAGATTGAGAGGCGGTTTCTACAGTAATGGGGTTGAGGTGATTCGCCGGAGAACTGCCCAAGAAAATGTTAGTTCGTCGGATTTTGATACCACTCTCGGTGATGATGACGACGAAGAAGACGGGGTGTTCCAAGGCAATTTGACGGTGAAAAATCCAAAATTCTGTGAAGAGTTGTTAGAACATAAGGGTTACCGGAGCCGGTGTGAGTACTTGATTGCCCATCCTGACTGTAACTCCGGCGGAATTTTCAATTACATTATGTTCTTCTACTGTAACTGCGAGTCAATCAGCTTTTTGGGGTATTTGTTATTGGGAATTTGGCTCGTGACTCTGTTCTATATGCTGGGCAACACTGCAGCAGACTACTTCTGTTGCTCTTTAGAGAAGCTTTCAAGTCTCCTGAAGCTTCCGCCCACTGTTGCAGGGGTTACTCTCCTCCCACTGGGGAATGGGGCCCCCGATGTGTTTGCCAGCATTGCTGCTTTCATGGGGAAAAATTCAGGTGAAGTGGGGCTCAACAGTGTGTTGGGTGGAGCGGTCTTTGTTACCTGCATTGTTGTGGGGGCTGTTTCTCTTGGGGTTGCAGACAAGAGGGTTCAGATAGATAAGAAATGCTTTGTCAGAGATATGTGCTTTTTTCTATTCACTCTCTTGTCCCTTGGTATTGTTTTGCTTGTTGGTGAGGTGAGTGTTGGAGGGGCAATTGCCTTTGTTTCAATCTATATTGTATATGTTTTCTTTGTTGCTGCAAATGAGATTTTGAGGAAACATGCCAGGAGCTTGAGGTTGGATGCTGTAACCCCATTGCTTCCGGTCACAGCATTTATTTTCTCCCATGGAAATGATGAGAATGATTCAGTTTACACCTCATTGCTCGAGTCTGACTCTGAAAATGATGTGCCGCATCTCCAAACCAAGCTGCCCCAGTGGATGTGGGCTTCCCATATGGCAATTTACTCGAACCAATCTCTGAAGTCTGGTGTAGAAGAGAATTCAAAGCCTGTCTGGGGTTGGAACGATGGGGACACGATGAACAACAACCCATACTTCTCTTGCTCTAGATTATGCTCATTTCTAGAGATGCCATTGATCCTGCCACGGCGACTGACAATCCCTATAGTTGAAGAGGAGCGGTGGTCGAAGGGGTATGCTGTGGCCAGTGTCACATTGGCCCCCATTCTTCTTGCATTTCTATGGAACACCCAAGATAGCCCATCTGTTTTGAGTGGAGGAATCACATATCTTATTGCTCTGCTGGTGGCATTGGGTGTGATATTTGGAATCAACCCATCAATCCTCGCGATAACTGTACTGGCATGGGGTAACTCAATGGGTGATTTAATGTCCAATGTTGCTTTGGCAATGAATGGGGGAGATGGAGTGCAGATTGCCATGTCAGGATGCTATGCTGGTCCTATGTTCAACACACTTGCTGGCTTGGGGATCTCAATGCTGCTTGGAGCCTGGTCTAGCAGGCCTGCCTCATACATAATTCCTCGAGATGGCACCTTGTTCTGCACAATGGGGTTTCTTGTATCAGGGCTTATCTGGTCACTCATTGTGTTGCCGCGAAGCGATATGCGACCTACCAAAACATTAGGATTTGGCTTAGTTACCATCTATTTGATATTCCTCCTAGTCAGGGTATTCACCTCTATGGGTGTCATGTCATTTGATGGTATTAGTTGA 1854 0.4612 MTESRGAYRTRHSRFRGAFNGICALVMFLFLFFNRSDFMAKSFVVNSPSVLHPQWRLRGGFYSNGVEVIRRRTAQENVSSSDFDTTLGDDDDEEDGVFQGNLTVKNPKFCEELLEHKGYRSRCEYLIAHPDCNSGGIFNYIMFFYCNCESISFLGYLLLGIWLVTLFYMLGNTAADYFCCSLEKLSSLLKLPPTVAGVTLLPLGNGAPDVFASIAAFMGKNSGEVGLNSVLGGAVFVTCIVVGAVSLGVADKRVQIDKKCFVRDMCFFLFTLLSLGIVLLVGEVSVGGAIAFVSIYIVYVFFVAANEILRKHARSLRLDAVTPLLPVTAFIFSHGNDENDSVYTSLLESDSENDVPHLQTKLPQWMWASHMAIYSNQSLKSGVEENSKPVWGWNDGDTMNNNPYFSCSRLCSFLEMPLILPRRLTIPIVEEERWSKGYAVASVTLAPILLAFLWNTQDSPSVLSGGITYLIALLVALGVIFGINPSILAITVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWSSRPASYIIPRDGTLFCTMGFLVSGLIWSLIVLPRSDMRPTKTLGFGLVTIYLIFLLVRVFTSMGVMSFDGIS* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0070 617 Gene3D - 411 605 IPR044880 -
Vvi11g0070 617 Gene3D - 191 336 IPR044880 -
Vvi11g0070 617 Pfam Sodium/calcium exchanger protein 463 604 IPR004837 GO:0016020|GO:0055085
Vvi11g0070 617 Pfam Sodium/calcium exchanger protein 161 303 IPR004837 GO:0016020|GO:0055085
Vvi11g0070 617 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 18 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0070 Vvi-Chr11 799692 801692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0070 102 609 Antiporters AT5G17850 39.394 3.08e-109 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0070 K13754 - vvi:100249061 1160.59