Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0032 ATGGCAATGGAGGACAATGGGAGTAACAAGGTGACCGGAATCAGGCAGATTGTTCGGTTGAAGGAATTCCTTCAGAAGTGGCAATCAGTCACTCTCAGCCCAAAAGGAAATAATAGTGTCCACCCCAATCAAACGCCCGGGGGCATTTCACCAGCAATTAATATGAGGTTGAGGAACTCAAATGTTATCTCAGATTCAGATGAGGATGGTTGCCACAGCCCTGAACCACCACCTGATGTCCCCAAAGGGTATTTGGCGGTTTATGTAGGGTCAGAGCTTCGGAGGTTCATCATTCCCACCAGCTATCTTACCCACCCGCTGTTCAAGGTGCTGTTGGAAAAGGTGGAAGAGGAGTTTGGATTTGATCACAGTGGTGGGCTCACAATCCCATGCGAGATTGAGACCTTCAAGTACCTGATGAAGTGCATGGAGAGCCATCCTGAGGCTCAACCTGATGAAAACAATACATCTGGAAGATCATTAACCTTGGAAGAGTAA 498 0.4759 MAMEDNGSNKVTGIRQIVRLKEFLQKWQSVTLSPKGNNSVHPNQTPGGISPAINMRLRNSNVISDSDEDGCHSPEPPPDVPKGYLAVYVGSELRRFIIPTSYLTHPLFKVLLEKVEEEFGFDHSGGLTIPCEIETFKYLMKCMESHPEAQPDENNTSGRSLTLEE* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0032 165 MobiDBLite consensus disorder prediction 34 53 - -
Vvi11g0032 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 140 IPR003676 GO:0009733
Vvi11g0032 165 Pfam Auxin responsive protein 66 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0032 Vvi-Chr11 528295 529247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0032 3 148 Calmodulin-binding Proteins AT3G43120 63.265 1.55e-67 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0032 K14488 - vvi:100266455 330.102