Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g1035 ATGGCAATCCTCTCAGAACGAACAATTGTGCTACTCTTCTTTCTTTCTTCTCTTATCATCCATGGAAGCCCAAAGCCTACCCTCCTCTACAAATTTTGTACTGAAAATTCCAACTATGTCCCCAATAGCACTTACCAGAGTAGCCTCAACCTCCTCCTCACTTCCCTGTCGTCAGATGCTACAATACTTAACGGCCGCAAATTCCACAACACGACCGCAGGCCAAGCGCCAGACATGGTATATGGCCTCTACTTATGCCGGGGAGATGTCACAGATGCAGTATGCCAGGACTGCGTCCAGACTGCAAGTCAAGAGATCCTGACCAAGTGTCCCAACAGAAAAGAGGCACTAAGTTGGTACGACCAGTGCATGTTTCGGTACTCCAATCGATCAATCTTCTCAATCATGGAAGAAAGGCCAAGTTTGATTAGTTTTGACTCACTCGATATGGAGGACCCAGATAGGTTTGATCAGATTGTGAATGAAACCATGGTGGGTTTGATTGAAAAGGCTACCCATAATTCTTTTGAGAGGGACATGTTTGAGACTGGAGAAGCAAATTTTAATGCGTCCACCAAGATATATGGCTTGGTGCAGTGCACACCAGATTTATCCGGCAGTAATTGTAGTACGTGCCTCGAGAATATTCTTTCTCGTATTACCAATTGTTGCCTTGGGAAGCAAGGGGGCAGGATTCTAGTTCCCAGCTGCAACTTCAGGTACGAGTTGCATCCATTCTATGGGGACTTAGCAGCAGCTACACCACCTGCACCTTCACCTCTGTCACCTCTGTCACCTCCAGGTAAAAAGGGAAACTCTTCCCAACTTCTAATTGCTATCATTGTTCCAGTAGCGGGCACATTGATAATTTCTGGCTTCCTCTGCTATTGTTGGCTAAAGAGGAAAAGGAAAGCAAAGAAGAAATACAATTCTACAGAAGAGGAAAAAGTTGAGAATGATATCACCACTGTGCAGTCATTGCAATTTGATTTTGGCACACTTGAAGCTACTACAAATAACTTCTCTGATGATAACAAGATTGGTGAAGGTGGATTTGGTGATGTGTACAAGGGTACACTTTCTAGCGGAAAAGAAATTGCTATAAAGAGGCTATCTAGAAGCTCTGCACAAGGCGCAGTAGAATTCAAGAATGAGGTTGTATTGGTAGCCAAGCTTCAACACAGAAACCTAGTGAGGTTATTGGGATTTTGCTTGGAAGGGGAAGAGAAGATACTTGTCTATGAATATGTGCCCAACAAAAGCCTTGACCACTTTCTGTTTGACCCTGATAAACAAGGACAACTGGATTGGTCAAGACGGTATAAGATTATTGGACGAATAGCTCGAGGGATTCTTTACCTTCATGAAGATTCTCCGCTCAAAGTTATACACCGTGATCTAAAAGCCAGCAATGTTTTGTTAGATGGTGATATGAACCCAAAAATTTCAGATTTTGGCATGGCAAGGATTTTTGGAGTAGATCAAACTCGAGGAAGTACCAAAAGAGTTGTTGGCACATATGGCTACATGTCTCCAGAGTATGCAATGCATGGACACTTCTCTGCCAAGTCAGATGTATACAGTTTCGGTGTCCTAGTTTTGGAGATAATAAGTGGCAAGAAGAACAGTTGTTTCTACGAATCAGGCCAAACTGAGGACCTTCTAAGCTATGCATGGAAACTTTGGAGGAATGGTACACCCCTGGAATTGATGGACCCGATCATGGGGGACTCCTATGCAAGAAATGAAGTCATTAGATGCATCCATATGGGTTTATTATGTGTTCAAGAAGATCCTGAGGACAGACCATCCATGGCATCAGTAGTCCTCATGCTCAGCAGTTACTCTGTTACTCCACCATTGCCTCAACAACCAGCATTCTGCATTGGCATTTGTCGGACTGTCCGTCCGTCTATGGCGATTATGTCAGATTCTGGCACTGAGATCTTGGTTCCGGCCTGCGCCATCATTGGGATAATCTTTTTTGTGGTTCAGTGGATTCTGGTCTCTCGCGTCAAGCTTTCTCCAAAGCGGCACTCGTTCTCTAACTCTAGCAAGAATGGCACCGCTGAGTATCTGATTGAGGAAGAAGAAGGCACCAATGGTCACAGCGTCGTTCACAAATGCGCTGAGATACAAAATGCTATCTCTGAAGGAGCAACCTTTTTCCTCTTTATCGAATATCTAACCACTCTAGAGGCAAGGAAGGGTGTTAGGAAGGCTTTTATCACTGCATTTAGATCTGGTGCAGTCATGGGTTTCCTTCTTGCTGCAAATGGTCTTTTGGTCCTCTATATTGCCAACAACCTCTTCAAGATATACTATGGTGATGATTGGGAAGGCCTTTTTGGGGCTATAACTAGTTATGGCCTTGATGGTTCTTCCATGGCTCTCTTTGGCAGAGTAGGTGGAGGAATCTATACAAAAGCTACTGATGTCGGTGCAAATCCTCATGGGCATCTTTGGTTTGGAAATATCAGGAAAACTAGAATGATGAGAAAAACAAAAAAGATTGGTCACCTTTGA 2526 0.4382 MAILSERTIVLLFFLSSLIIHGSPKPTLLYKFCTENSNYVPNSTYQSSLNLLLTSLSSDATILNGRKFHNTTAGQAPDMVYGLYLCRGDVTDAVCQDCVQTASQEILTKCPNRKEALSWYDQCMFRYSNRSIFSIMEERPSLISFDSLDMEDPDRFDQIVNETMVGLIEKATHNSFERDMFETGEANFNASTKIYGLVQCTPDLSGSNCSTCLENILSRITNCCLGKQGGRILVPSCNFRYELHPFYGDLAAATPPAPSPLSPLSPPGKKGNSSQLLIAIIVPVAGTLIISGFLCYCWLKRKRKAKKKYNSTEEEKVENDITTVQSLQFDFGTLEATTNNFSDDNKIGEGGFGDVYKGTLSSGKEIAIKRLSRSSAQGAVEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDHFLFDPDKQGQLDWSRRYKIIGRIARGILYLHEDSPLKVIHRDLKASNVLLDGDMNPKISDFGMARIFGVDQTRGSTKRVVGTYGYMSPEYAMHGHFSAKSDVYSFGVLVLEIISGKKNSCFYESGQTEDLLSYAWKLWRNGTPLELMDPIMGDSYARNEVIRCIHMGLLCVQEDPEDRPSMASVVLMLSSYSVTPPLPQQPAFCIGICRTVRPSMAIMSDSGTEILVPACAIIGIIFFVVQWILVSRVKLSPKRHSFSNSSKNGTAEYLIEEEEGTNGHSVVHKCAEIQNAISEGATFFLFIEYLTTLEARKGVRKAFITAFRSGAVMGFLLAANGLLVLYIANNLFKIYYGDDWEGLFGAITSYGLDGSSMALFGRVGGGIYTKATDVGANPHGHLWFGNIRKTRMMRKTKKIGHL* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g1035 841 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 636 - -
Vvi10g1035 841 FunFam cysteine-rich receptor-like protein kinase 10 417 619 - -
Vvi10g1035 841 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Vvi10g1035 841 ProSiteProfiles Gnk2-homologous domain profile. 138 246 IPR002902 -
Vvi10g1035 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Vvi10g1035 841 Pfam Salt stress response/antifungal 152 242 IPR002902 -
Vvi10g1035 841 Pfam Salt stress response/antifungal 33 129 IPR002902 -
Vvi10g1035 841 Pfam Inorganic H+ pyrophosphatase 730 816 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi10g1035 841 SMART serkin_6 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g1035 841 CDD STKc_IRAK 347 612 - -
Vvi10g1035 841 SUPERFAMILY Protein kinase-like (PK-like) 327 639 IPR011009 -
Vvi10g1035 841 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 132 - -
Vvi10g1035 841 FunFam Cysteine-rich receptor-like protein kinase 10 301 416 - -
Vvi10g1035 841 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g1035 841 Gene3D Phosphorylase Kinase; domain 1 300 416 - -
Vvi10g1035 841 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Vvi10g1035 841 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Vvi10g1035 841 FunFam Cysteine-rich receptor-like protein kinase 10 141 246 - -
Vvi10g1035 841 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672|GO:0006468
Vvi10g1035 841 Gene3D - 142 246 IPR038408 -
Vvi10g1035 841 Gene3D - 25 131 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g1035 Vvi-Chr10 18107110 18113810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g1035 14 638 Receptor kinase-like Gene Family AT4G05200 51.567 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi10g1035 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g1035 - - vvi:100266208 1212.21