Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g1013 ATGGGAGAAGACTCAGCTGCAGCAACAGCCTCCATCGACTCCTCTAATATTGGCTTCAAGCTTCTGAAGAAGCACGGATGGAAAGAAGGGACGGGTCTTGGCGTTTCTGGACAGGGTAGGTTGGAGCCTGTGCAAGCATATTTAAAGAAGAATAAACGAGGCTTGGGGGCGGATAAAGTAAAGAAGACTGCTGTGGGATCTTATGAAAATTTGCCCTCTAATGGGAAAACTGACAAGGAACATTTGCCTACAAGAAAGAAAGGGAAGACTGTATCTAAAAGGATGAAGAAGATGCTGGAGGAAGAAAAGCAGTTACAAGAGAAGGAATTTGAGCGGGCCTTTTTTAGGGAATTCTGGCCAGATAACGTTTGA 372 0.4489 MGEDSAAATASIDSSNIGFKLLKKHGWKEGTGLGVSGQGRLEPVQAYLKKNKRGLGADKVKKTAVGSYENLPSNGKTDKEHLPTRKKGKTVSKRMKKMLEEEKQLQEKEFERAFFREFWPDNV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g1013 123 SMART G-patch_5 12 58 IPR000467 GO:0003676
Vvi10g1013 123 Pfam G-patch domain 15 57 IPR000467 GO:0003676
Vvi10g1013 123 ProSiteProfiles G-patch domain profile. 14 60 IPR000467 GO:0003676
Vvi10g1013 123 PANTHER BAT4 PROTEIN-RELATED 6 123 IPR039146 -
Vvi10g1013 123 MobiDBLite consensus disorder prediction 66 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g1013 4 56 C2H2 Transcription Factor Family AT5G26610 45.283 7.43e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g1013 - - vvi:100254152 217.238