Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0951 ATGGCTTTGGAAACTGTCGGAGGGGTCGTGCTGGACAAAGTTATAGGAGAATTGATAAAACCCTTTGTGGATGGAGGAAAGAAGCAAGCTGCGTTCGGTGACATCTTACAACGAGTCAAGTCCATTATCAAACTCATAGGGCCGACCGTCCGTCAGATCAAAAAATTGAGCGCAGAGTTGGATCGTCCAAAGGAGGAAAGTGAGAACTTAATCCAACTGTTTGATGAAGGCGAGAAGCTTATTCAAAAATGCTCTAAGCTCAATTGGTGGATGCCCAATCGCTGGAAATACGCCAATAAGCTTACTGCCTTTTACGAGTCTCTTCTTCGCTTCTTCCAGTTCCATATGCCGCTGCAACAATTTATGACCAACATGGAGATTTTGGCCCATCTGCAATCTCAATTCAGATATGGAACTGGTGGGGTTTCTGGTCAAATGGGGTATTTGGGTTCGGGAGGTAGTCGGGTTTCTGGTGAGATTGGATACTTGGATCCTTGCAATGCCCCTGACCCCCCTGATTTTATGGTGGGACTGGATGTGCCTCTGAAAGAAGTGAAAAAGCGGCTGTTCAAGGATGATACATCAGTGATTGTGGTATCGGCACCTGGAGGATGTGGGAAGACCACACTGGTTCAAAAACTTTGTCAAGACCCGGATGTTAAAGAAAATTTTAAGGACAACATCTTCTATGTCACCGTGTCCAAGGTGCACAACCTAAAACTCATAGTACGGAAACTATTTGAACATAATGGTTTCCGGGTGCCTGAGTTTCAAACTGATGAAGATGCAATCAACCAGTTGGAACAACTGCTGAAAAACCAAGCAAGAAAAGCTCCTATACTGTTGGTCCTTGATGATGTTTGGAAGGAACCTGAATTCCCTCTTCAGAAGTTTGCATTTAAAATACCAGAATACAGGATTCTGGTTACATCAAGATATGAATTTCCAAGCTTTGGCTCTACCTACAAACTGAAATTGTTGAATGATGAAGATGCCATGAAGCTTTTTCGGCACTCAGCATTCCTGACAGATGGGGATTTCATGCCGGATGAAGATTTTGATGAAGATCTTGTGAATGAGATTGTGAAAAGGTGCGGGGGATTCCCTCTGGCCCTCCAAGTCATTGGCGGATCACTCTGTGGGCAACCAGTAGAGATCTGGAAAAGCAGACTGATGGAATTTTCGAAAGGTCAATCCATTTTCGATTCTGGGAAACGTCTTCTTGATTGCCTCCAACTTAGCTTAACTTCCTTGGATGGTGAGCAGAAGGAGCGCTTTATGGACCTGGGTTCATTTCCTGAAGACCAAAAAATACCTGTCACTGCTCTTATAGATATGTGGGCAGAATTGTACAAACTCGATAAAAATGGTGTGCAGGCTATTTCCAACCTTCATAAACTCTCCTTACAGAATCTGCTCAAACTGGTAGTCACAAGGAAAGATGCAACTGAGGTTGATGGCTACTATGACGAGGCCTTTGTCTTGCAACATGACCTTCTCAGAGACCTAGCCATGCATGAGAGCAGCCAGGAACCTATGGAACAAAGGAAAAGACTAATCCTTGACTTGAGTGGAAATAAGCTCCCTGAGTGGTGGACTGAAGAAAAACAACCCTGCTTCAAGGCTCGGCTTATGTCAATCTCCACAGACCAAATGTTCTCTTCAAGCTGGTGCAACATGCAAGTGCCTGAAGTGGAGGTTCTGATACTCAACTTTCAGGCAACGGAAAACTACACATTCCCGAACTTCATGAAGCAAATGGATAATTTGAAGGTCTTAATAGTAACAAATTATGGTTCCAGTGCTGCTGAGCTGATTAATTTTTCAGTCCTCGGTTCTTTATCCCGTCTAAAGAGAATCAGGTTAGAGCAGGTTTCAATACCAACCCTCTGCGACACCATGGTAGAGTTAAAGAATGTGGAGAAAATATCCTTGGTTATGTGTAAGATCAATCAGGCTTTTAACAGTTGTGCCATCCAGATTTCCAACATGTTGCCGAATCTTCTGGAAATAAATATCAGCTACTGCAGTGACCTGGTGGGATTACCTGAGGGGCTCTGTGATTTAGTCCATCTAAAGAAGCTCAGCATCTCCAACTGCCATAAGCTATCTGCACTGCCAGGAGGAATCGGGAGGCTGGAAAATCTTGAAGTGCTGAGGCTTCATGCTTGCACAAAACTATTGGGATTGCCAGACTCAATCGGAGGCCTCCACAAGTTGACTGTTCTTGATATTACTGGTTGTCTTCGGATGGCGAAACTGCCAAAACAAATGGGTAAGTTGTGTAGCTTGAGAAAGCTCTACATGAGAAGGTGCTCAGGTTTGAGAGAGCTGCCACCATCAATCATGGATCTGAAGCAGTTGAAGAAAGTAATCTGTGACATAGAGACGGCCGAGCTGTGGGAAGAGCACCATTTCACCAATTTGAAGATAACAATACCCGAAGAGACTATTGATTTAAATTGGCTTTGA 2472 0.4397 MALETVGGVVLDKVIGELIKPFVDGGKKQAAFGDILQRVKSIIKLIGPTVRQIKKLSAELDRPKEESENLIQLFDEGEKLIQKCSKLNWWMPNRWKYANKLTAFYESLLRFFQFHMPLQQFMTNMEILAHLQSQFRYGTGGVSGQMGYLGSGGSRVSGEIGYLDPCNAPDPPDFMVGLDVPLKEVKKRLFKDDTSVIVVSAPGGCGKTTLVQKLCQDPDVKENFKDNIFYVTVSKVHNLKLIVRKLFEHNGFRVPEFQTDEDAINQLEQLLKNQARKAPILLVLDDVWKEPEFPLQKFAFKIPEYRILVTSRYEFPSFGSTYKLKLLNDEDAMKLFRHSAFLTDGDFMPDEDFDEDLVNEIVKRCGGFPLALQVIGGSLCGQPVEIWKSRLMEFSKGQSIFDSGKRLLDCLQLSLTSLDGEQKERFMDLGSFPEDQKIPVTALIDMWAELYKLDKNGVQAISNLHKLSLQNLLKLVVTRKDATEVDGYYDEAFVLQHDLLRDLAMHESSQEPMEQRKRLILDLSGNKLPEWWTEEKQPCFKARLMSISTDQMFSSSWCNMQVPEVEVLILNFQATENYTFPNFMKQMDNLKVLIVTNYGSSAAELINFSVLGSLSRLKRIRLEQVSIPTLCDTMVELKNVEKISLVMCKINQAFNSCAIQISNMLPNLLEINISYCSDLVGLPEGLCDLVHLKKLSISNCHKLSALPGGIGRLENLEVLRLHACTKLLGLPDSIGGLHKLTVLDITGCLRMAKLPKQMGKLCSLRKLYMRRCSGLRELPPSIMDLKQLKKVICDIETAELWEEHHFTNLKITIPEETIDLNWL* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0951 823 Gene3D Ribonuclease Inhibitor 508 822 IPR032675 -
Vvi10g0951 823 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 823 IPR039203 GO:0050832
Vvi10g0951 823 PRINTS Disease resistance protein signature 711 727 - -
Vvi10g0951 823 PRINTS Disease resistance protein signature 365 379 - -
Vvi10g0951 823 PRINTS Disease resistance protein signature 196 211 - -
Vvi10g0951 823 PRINTS Disease resistance protein signature 274 288 - -
Vvi10g0951 823 Gene3D - 412 507 IPR036388 -
Vvi10g0951 823 FunFam Probable disease resistance protein At5g66900 168 317 - -
Vvi10g0951 823 SUPERFAMILY L domain-like 511 797 - -
Vvi10g0951 823 Pfam NB-ARC domain 182 395 IPR002182 GO:0043531
Vvi10g0951 823 Gene3D - 161 315 IPR027417 -
Vvi10g0951 823 Coils Coil 257 277 - -
Vvi10g0951 823 Gene3D - 326 411 IPR042197 -
Vvi10g0951 823 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 134 IPR008808 -
Vvi10g0951 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 429 IPR027417 -
Vvi10g0951 823 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0951 Vvi-Chr10 16398365 16402814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0951 270 795 WRKY Transcription Factor Family AT5G45050 23.941 1.23e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0951 - - vvi:100258423 1640.94