Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0914 ATGGACGAGATGTATATATGTGCTACTTTAGCTGCTATTTTGGCAGCTAGGTTTGTTCTTGATGCAATTAGGATTCATGCTCTTCTTAGTGCTATAAACAACAATGATAGTAGCAACATAGTTCATTTTCCTGCTGGTCCAAATGCTCTTTCTGACGTGCTTATGAGTACACCCATCTTCACAAGGGATGGAGAATATGAAAGTGGTTTTACAGTAGTTGCCGCAGCAACAGTAGTTGGCGATGTAACTGGTTTTGGTTTTGATCCTGAACTGGATTTTGCTCTTAGATTTTCAATGGAAGAGGAAAAGGCGAGACAAGAAGCTGCTGCTAAAAAGGTCGCGTGGAAAGGGTGGTTCAGGTGCATCGTCCGTTATGGGCATCATGATGTTCACCAAAATGTTGACTCTTTTGAATCTGAACTTGTTGATATGGGCTAG 438 0.4155 MDEMYICATLAAILAARFVLDAIRIHALLSAINNNDSSNIVHFPAGPNALSDVLMSTPIFTRDGEYESGFTVVAAATVVGDVTGFGFDPELDFALRFSMEEEKARQEAAAKKVAWKGWFRCIVRYGHHDVHQNVDSFESELVDMG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0914 145 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 26 113 IPR027040 GO:0006511|GO:0008540
Vvi10g0914 145 Gene3D - 88 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0914 Vvi-Chr10 15060391 15062667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0914 119 143 Inorganic Solute Cotransporters AT2G40540 76.000 8.87e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0914 K03029 - csin:114309395 113.235