Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0911 ATGCAGGTGCTTGAACTGGGAATTGTGGCTCATTCAGTAGTGATAGGGCTCTCAATGGGAGCCTCAAACAACACTTTCATAATAAACCCTATTGTGGCAGCCCTTTGCTTCCATCAAATGTTTGAAGGAATGGGCCTTGGTGGCTGCACCTTTCAGGCTGAGTACAAGTTTTTGAAGAAGGTTTTGATGGTGTTCTTCTTCTCTGTGACAACCCCATTTGGGATTGCGCTTGGGATAGCTTTATCCAAAACATATAAAGACAACAGCCCTACCTCATTGATCACTGTAGGACTACTGAACGCCTCCTCGGCTGGGCTTTTGATCCACATGGCTTTGGTGGATCTTCTCTCAGCTGAATTCATGGGCCCGAAGTTGCAAGGTAGCATCAAGCTCCAGATTAAGGCCTATGTTGAAGTTCTTTTGCGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCTTGA 462 0.4654 MQVLELGIVAHSVVIGLSMGASNNTFIINPIVAALCFHQMFEGMGLGGCTFQAEYKFLKKVLMVFFFSVTTPFGIALGIALSKTYKDNSPTSLITVGLLNASSAGLLIHMALVDLLSAEFMGPKLQGSIKLQIKAYVEVLLRAGGMSLMAKWA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0911 153 NCBIfam ZIP zinc/iron transport family 2 153 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vvi10g0911 153 PANTHER ZINC/IRON TRANSPORTER 2 150 - -
Vvi10g0911 153 Pfam ZIP Zinc transporter 2 150 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0911 Vvi-Chr10 15002297 15002865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0911 3 153 Inorganic Solute Cotransporters AT1G31260 75.497 6.55e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0911 K14709 - vvi:100240875 250.366