Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0909 ATGGCTTCCTTGAAAAACCTTGGAGCTCTAACCCTCCTTCTGCTCCTGCTTTCCTTGACAGTGCAAACTTGGGGCAAGGAAGATGCCGACGGAGCGGGATCGGAATGCCGAGTGGCCAAAGAAGTATCAGAAGAAAAGGCATCAGCCTTAAAGCTGAAGGTGATAGCGATATTCACGATACTGATTGCTAGCATCTTGGGCATCTCCTCCCCCATACTTCTACAAGGCATGCCACTATTTAAACCAGATGGAAAAGTGTTCGTCCTGGTGAAAGCATTTGCATCGGGTGTTATCCTGGCCACCGGCTACGTCCACGTGCTGCCGGATTCATTTGAGTGCTTGACTTCTCCATGTCTGCCGGACTATCCATGGAGCAAATTCCCATTCACAACGTTCATAGCCATGGTCGCAGCCGTTTTAACACTGATGATGGACTCTTTTGCGATGAGTTATTATAGGAAACATGGTATGAGTGAAGTGGAATGCGAGCATGGGAATCAAATAGAGCATGGACATGGGCATTCACGTGGAGTTGGTGTGAAGAAGCTTGATGAAGAGGCCTCAAAATTGTTGAGATACCAAATTATTGCTCAGGTACTGGAACTAGGGATTGTGGTGCACTCAGTGGTGATTGGGCTTTCAATGGGGGCCTCTCAAAATGCAGGTACGATCAGGCCCCTCATTGCTGCTATTTGTTTCCATCAATTGTTTGAAGGAGTGGGTCTTGGTGGATGCTTATTACAGGCTGAATACAAGGCCAAGATGAAGGCCATCATGGTGTTTTTCTTCTCGGTCACCACCCCCTTTGGGATCGCGCTGGGAATCGGCCTATCACATGTGTACAGTGACAACAGCCCTGCGTCTCTGATTGTGGTTGGAGTACTGAATGCAACATCAGGTGGACTACTGAATTACATGGCGTTGGTGGACCTGCTGGCCGCTGATTTCATGGGCACCAAATTGCAATCAAACATGAAGCTTCAAATGTGGGCATTCATCGCTGTGTTATTGGGTGTGAGTGGGATGTCCTTGATGGCAAAATGGGCCTAA 1050 0.4819 MASLKNLGALTLLLLLLSLTVQTWGKEDADGAGSECRVAKEVSEEKASALKLKVIAIFTILIASILGISSPILLQGMPLFKPDGKVFVLVKAFASGVILATGYVHVLPDSFECLTSPCLPDYPWSKFPFTTFIAMVAAVLTLMMDSFAMSYYRKHGMSEVECEHGNQIEHGHGHSRGVGVKKLDEEASKLLRYQIIAQVLELGIVVHSVVIGLSMGASQNAGTIRPLIAAICFHQLFEGVGLGGCLLQAEYKAKMKAIMVFFFSVTTPFGIALGIGLSHVYSDNSPASLIVVGVLNATSGGLLNYMALVDLLAADFMGTKLQSNMKLQMWAFIAVLLGVSGMSLMAKWA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0909 349 PANTHER ZINC/IRON TRANSPORTER 49 343 - -
Vvi10g0909 349 Pfam ZIP Zinc transporter 163 346 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi10g0909 349 NCBIfam ZIP zinc/iron transport family 42 349 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0909 Vvi-Chr10 14851635 14852877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0909 32 349 Inorganic Solute Cotransporters AT1G31260 53.571 3.58e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0909 K14709 - vvi:100242590 659.448