Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0904 ATGGAAGGAGTGTTGCCTGAACTAATATTCTATTCTCTGGTAGCTTTATGTATTGTTATATGGATTATTTTGTTTATATGGCTTGGCAATGTTCTGTATCTAGAGCCCAGCAACATCCAGCTCAAGCTTCGAAGGCAAGGGATCAAAGGTCCCCCGCCTGCTTTTGTAATGGGTAATATTCCTGAGATGAAGCGAATCATGTCAATGGCTGCAGATGCTCCACGCAGTGAAGCTCATCTACCACTGGGATTTTCCACTTCCACTACCTTCCCTTATTTCGCTCAGTGGACTAAGCTATATGGAGGAACATTCACGTTTGCGCTTGGAAATGAACAACTTTTGTATGTGGCCGACACCAAACTAGTGAAGGAAATAAATCTCAGCAAAACATTAGACTTGGGGAAACCTTCTTATCTGCAGAAGGACCGAGGGCCTTTACTAGGGAAGGGCCTTATTACCTCAAATGGTGCAGTTTGGTTCCACCAGAGGAAGACCATAGCTCCTCAGCTCTTCATGGATAAGGTCAAGCTGAAGATGGTGATTCAAGAGGTGCTAAGGCTTTACCCAGGAGTTGCATTTGTGTCAAGGCAGACCTTGAAAGATGTGAAGCTTGGTGATATTTTGGTTCCAAAAGGTGTCAACATTTGGATCTGGATACCAGCGCTTCACCAAGACCCTGAGTTGTGGGGATCTGATGCTGAAAAGTTCAACCCTGAGAGGTTTGCTAATGGGATTTCGGGGGCCTGCAAGTCTCCCAATGCCTACATTCCATTTGGTGTAGGGACCCGAATGTGTCCTGGCCAGAACTTAGCCATTACAGAAATGAAGATCTTGTTTACTATCATTCTATCACACTTCTCCCTCTCCATCTCTCCTAATTATCTCCATTCCCCTCGCTTGAATTTGCTGCTAGAGCCCGAATATGGGGTGAATCTCATCATCAGGAAGATATGA 954 0.4497 MEGVLPELIFYSLVALCIVIWIILFIWLGNVLYLEPSNIQLKLRRQGIKGPPPAFVMGNIPEMKRIMSMAADAPRSEAHLPLGFSTSTTFPYFAQWTKLYGGTFTFALGNEQLLYVADTKLVKEINLSKTLDLGKPSYLQKDRGPLLGKGLITSNGAVWFHQRKTIAPQLFMDKVKLKMVIQEVLRLYPGVAFVSRQTLKDVKLGDILVPKGVNIWIWIPALHQDPELWGSDAEKFNPERFANGISGACKSPNAYIPFGVGTRMCPGQNLAITEMKILFTIILSHFSLSISPNYLHSPRLNLLLEPEYGVNLIIRKI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0904 317 SUPERFAMILY Cytochrome P450 46 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 179 - -
Vvi10g0904 317 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 258 267 IPR017972 GO:0005506|GO:0016705
Vvi10g0904 317 PRINTS P450 superfamily signature 256 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PRINTS P450 superfamily signature 179 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PRINTS P450 superfamily signature 265 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PRINTS B-class P450 signature 265 276 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PRINTS B-class P450 signature 196 223 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PRINTS B-class P450 signature 256 265 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 PRINTS B-class P450 signature 179 190 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 Gene3D Cytochrome P450 176 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 Gene3D Cytochrome P450 37 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 Pfam Cytochrome P450 92 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 Pfam Cytochrome P450 177 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0904 317 SUPERFAMILY Cytochrome P450 177 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0904 Vvi-Chr10 14720483 14722648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0904 177 310 Cytochrome P450 AT5G24900 56.716 5.77e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0904 - - vvi:100263117 358.221