Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0901 ATGGATAAGGTCAAGGGCAATTTGAACATAATGGTGGAATCTGCAAGCAACCTGGTGAGCTCATGGCTTGGTTTAATCGAACTTGGGAGTGGGAGTGCAGACATAAGAGTGGATGACTACATTAGAAGCTTCACCTCTACTGTAATTTCAAAGATGATGTTTGGAAGCCACCATTCCAAAGCAGTTGAATTGTTTCCGAAGTGTAGGGCCCTTATGAAGAACTTGCAAACTCCGACAATACTCAAAGGGATTCCTTTCTTCAGATATTTACCAACCAAGGAAAATCGGGATGTATGGAGACTAGAGAGAGAGATTCACGCTTCACTCATCGACATAGTAAAGGAAAATCCCGAAGCTGCATCTGATAAAATGGCACAGATTATCATGGAGAGTGCTAAGACTGGTGAACTTGGGCCATCCACACCCGACCAGTACATAGTTGACAATTGCAAGGATGTGTACCTTGCTGGATTTGAAGTGACTGCTGTGGCCACATTATGGGGTTTAGTTCTGTTGGCTTCAAATCCTGAATGGCAAGCTCGCCTCCGTGCTGAAATTCTTGAAGTTTGTGGAGGCCATGTACCAGACACCAATATGCTTGGCAAGATGAAACTACTGAAGATGGTGATTCAAGAGGTGCTAAGGCTTTACCCAGGAGTTGCATTTGTGTCAAGGCAGACCTTGAAAGATGTGAAGCTTGGTGATATTTTGGTTCCAAAAGGTGTCAACATTTGGATCTGGATACCAGCGCTTCACCAAGACCCTGAGTTGTGGGGATCTGATGCTGAAAAGTTCAACCCTGAGAGGTTTGCTAATGGGATTTCGGGGGCCTGCAAGTCTCCCAATGCCTACATTCCATTTGGTGTAGGGACCCGAATGTGTCCTGGCCAGAACTTAGCCATTACAGAAATGAAGATCTTGTTTACTATCATTCTATCACACTTCTCCCTCTCCATCTCTCCTAATTATCTCCATTCCCCTCGCTTGAATTTGCTGCTAGAGCCCGAATATGGGGTGAATCTCATCATCAGGAAGATATGA 1041 0.4476 MDKVKGNLNIMVESASNLVSSWLGLIELGSGSADIRVDDYIRSFTSTVISKMMFGSHHSKAVELFPKCRALMKNLQTPTILKGIPFFRYLPTKENRDVWRLEREIHASLIDIVKENPEAASDKMAQIIMESAKTGELGPSTPDQYIVDNCKDVYLAGFEVTAVATLWGLVLLASNPEWQARLRAEILEVCGGHVPDTNMLGKMKLLKMVIQEVLRLYPGVAFVSRQTLKDVKLGDILVPKGVNIWIWIPALHQDPELWGSDAEKFNPERFANGISGACKSPNAYIPFGVGTRMCPGQNLAITEMKILFTIILSHFSLSISPNYLHSPRLNLLLEPEYGVNLIIRKI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0901 346 SUPERFAMILY Cytochrome P450 3 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 287 296 IPR017972 GO:0005506|GO:0016705
Vvi10g0901 346 PRINTS P450 superfamily signature 156 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS P450 superfamily signature 285 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS P450 superfamily signature 208 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 338 - -
Vvi10g0901 346 Gene3D Cytochrome P450 1 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 Pfam Cytochrome P450 9 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS E-class P450 group I signature 145 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS E-class P450 group I signature 284 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS E-class P450 group I signature 165 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0901 346 PRINTS E-class P450 group I signature 294 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0901 Vvi-Chr10 14611157 14612634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0901 2 339 Cytochrome P450 AT5G24900 42.165 8.60e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0901 - - vvi:100249367 696.427