Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0848 ATGAAGATCGAGGATTTGGATGATGTTGAATCTGATGGGAAGGAGAGTGTTTATAGAAGGCAGGTTGTTAAGGCAGAGTTCAGATGGTGGGATGAAGTTGATCAGTTCCTTCTGCTTGATGCGGTTCCATTTCCTAAGGATGTCCCACGGCTGAAGCAGCTTGGTGTAGGTGGCTGGCAGCTTTGGGGAATGCTCAGCACTATCGCCGCTGGGCTTGCCATTGATGTGTACAGCCCCATAAGTGGCAATGCTGATGGTATCGCTGAAATGGCTGAAATGAGTCACAAAATATGTCAAAGAACTGATTCTCGTGCTAGCATGGGAGGATATATCTCATCACAATCTGTGAAGAAAATCATTGAAATTAATTCCTACATGCTTGGCACAATGGCTGGAAGAGCTGCTGAAGACCACATTAAATTGTTGCATCAGCCAACTTATCGGAATCAAAGGTTTAAGTTGTGGCTAAGCTATTTTGAGATATATGGTGGAAAACTCTTTGATCTTCTCAGTGATAGAAAGAAACTTTGTATGAGAAAAGATGGAAGGCAACAAGTTTGCATTGTTGGACTGCAAGAATTTGAAGTTTTTGGATGTACAGGTTGTGAAAGGGATCCTTGA 621 0.4267 MKIEDLDDVESDGKESVYRRQVVKAEFRWWDEVDQFLLLDAVPFPKDVPRLKQLGVGGWQLWGMLSTIAAGLAIDVYSPISGNADGIAEMAEMSHKICQRTDSRASMGGYISSQSVKKIIEINSYMLGTMAGRAAEDHIKLLHQPTYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMRKDGRQQVCIVGLQEFEVFGCTGCERDP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0848 206 Gene3D Kinesin motor domain 106 202 IPR036961 -
Vvi10g0848 206 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 101 137 IPR029055 -
Vvi10g0848 206 Pfam Inorganic H+ pyrophosphatase 62 128 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi10g0848 206 PANTHER KINESIN-RELATED PROTEIN 6 130 196 IPR027640 GO:0003777|GO:0007018
Vvi10g0848 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 199 IPR027417 -
Vvi10g0848 206 Pfam Kinesin motor domain 141 196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0848 Vvi-Chr10 13244745 13245680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0848 63 131 Primary Pumps ATPases AT1G15690 53.623 3.53e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0848 K10393 - nnu:104598962 129.028