Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0847 ATGGTTGAAATTGTTATTTCCGTTGCAGCAAAAGTTGCAGAGTACCTGGTTGATTCAATTATACGTCCACTGGGTTATCTGGTTAACTACCATCGCAACATTACGGATCTCAACCAACGAATTGACAGTCTCCATCTTGCAAGGGAGAGGCTGCAGGTACCTGTGGATGAGGCTAATAGGCAAGGGGATGAAATCTTTCCTGGTGTTCAGGAGTGGCAGACGTATGCCGAAGGGATCATCCAAAAGAGAAACGATTTCAATGAAGATGAAAGGAAAGCAAGCAAGAGCTGTTTCTATTTAAAGTCCCGCTACCAACTAAGCAAGCAAGCAGAGAAGCAGGCTGCGGAGATTGTTGATAAAATCCAAGAAGCTCATAACTTTGGTGACAGAGTATCGTATCGCCCTCCTCCTCCTCCTCCTCCATTCATCAGCTCTGCATCTTTCAAAGATTATGGGGCTTTCCAGTCAAGAGAGTCTACTTTTAACCAAATTATGGAGGCCTTGAGAAACGAAGATATGCGCATGATCGGTGTCTGGGGAATGGGCGGCGTGGGCAAAACCACTCTTGTCAAACAAGTAGCCCAACAAGCGGAGGAAGACAAGCTCTTTCACAAGGTGGTCATGGTGTTACACATATCCCAAACTCCCAACATCGCAGAAATTCAAGAAAAAATTGCAAGAATGTTGGGTTTGAAATTTGAGGTGAAGGAGGATAGAGCAGGTCGCCTGAGGCAAAGGTTGAAGAGAGAGGAGAAAATCCTGGTGATCTTAGATGATATCTGGGGGAAACTTGAGTTGGGAGAAATAGGAATTCCTTACCGAGATGATCACAAGGGGTGCAAAGTGCTGCTGACTTCCCGGGAGCATCAGGTTTTATCTAAAGATATGCGTACTCAAAAGGAGTTCCATCTTCAACATTTAAGTGAAGATGAAGCCTGGAATTTATTCAAGAAGACAGCAGGTGATTCAGTGGAGAGGCCTGAACTGCGTCCCATAGCAGTTGATGTAGCTAAAAAATGTGACGGTCTACCAGTTGCAATTGTCACCATTGCAAATGCATTAAGAGGTGAGAGTGTGCATGTATGGGAGAATGCCTTGGAAGAACTGAGAAGGTCTGCACCAACAAACATCAGAGGAGTGAGTAAAGACGTCTACTCATGTCTGGAGCTGAGCTACAACCATTTGGAAAGTGATGAAGTAAAGTCCTTGTTTTTACTTTGTGGTGTTCTGGGGTTGGGAGATATTTACATGGATTTCTTGCTACTATATGCTATGGGATTGAATTTGTTTAAAGGATTCTTTTCATGGGAGAAAGCAGCAAATAAACTAATCACACTGGTGGAAAATCTGAAAGGCTCAAGCTTGTTGCTTGACGATGAAGACAGAGGCAATGAGAGATTTTCGAGCTTGTTTTTCAATGACGCGTTTGTCAGAATGCATGATGTTGTTCGTGATGTTGCCATATCAATTGCATCCAAAGATCCTCATCAATTTGTGGTGAAAGAAGCGGTTGGATTACAAGAAGAATGGCAATGGATGAATGAATGCAGAAATTGCACTCGTATCTCTTTGAAATGCAAAAACATAGATGAGCTTCCTCAAGGATTGGTATGTCCCAAACTTAAGTTCTTTTTATTGTATTCAGGTGATTCTTACTTGAAAATTCCAGACACCTTTTTCCAAGACACCAAAGAACTGACAGTTTTAGATTTGTCTGGAGTGTCTCTCAAGCCATCTCCTTCATCGCTTGGTTTTCTTTTAAATCTTCGCACATTGTGTCTAAATAGATGCGTGCTCGAAGACATAGCAGTAATTGGACACCTGGAGAGACTACAAGTTCTTAGTTTGGCTTGCTCCCACATTTATCAGTTGCCAAAAGAAATGATGAAATTGAGTGATCTAAGGGTGTTGGATTTGCGGTATTGCTTCTCCCTCAAAGTAATTCCACAAAATCTTATATTCAGTCTATCTCGATTAGAGTATTTGAGCATGAAAGGAAGTGTTAATATTGAATGGGAGGCAGAAGGATTTAATAGCGGAGAAAGAATTAATGCTTGCCTTTCTGAGCTGAAACACCTATCCGGCTTGAGGACTTTGGAGTTAGAAGTATCTAATCCCAGTTTGCTTCCCGAAGATGATGTGCTCTTTGACAACTTGACATTGACCAGATATTCAATAGTAATAGGTGATTCTTGGAGGCCATACGATGAGGAGAAAGCCATAGCAAGGTTGCCAAATGATTATGAGTATAAAGCCTCGAGAAGGTTGAGGCTGGATGGGGTTAAAAGTCTTCATGTGGTGAACCGCTTCTCCAAACTGTTGAAGAGAAGTCAAGTTGTACAGTTGTGGAGATTGAATGATACTAAACATGTGGTTTATGAGTTAGACGAGGATGGTTTTCCTCAAGTGAAGTATCTCTGTATCTGGAGCTGTCCTACCATGCAATACATCCTTCATTCCACTTCAGTGGAATGGGTTCCACCACGTAATACCTTCTGTATGTTGGAGGAACTGTTTCTTACTTCCCTCAGTAACTTGGAGGCAGTATGCCATGGCCCAATTCTGATGGGGTCTTTTGGTAACTTAAGAATTGTAAGAGTGAGTCATTGTGAGAGGTTGAAATATGTCTTCTCTCTTCCCACACAACATGGAAGGGAATCAGCTTTTCCTCAACTGCAATCCTTGTCACTGAGGGTTCTCCCAAAGCTCATTAGCTTCTACACCACAAGAAGCAGCGGTATCCCGGAGTCGGCGACATTTTTCAATCAACAGGAAGCATTCCCTAATTTGGAAGAATTGAGATTGACGTTAAAGGGCACTGTGGAGATATGGCGGGGCCAATTTTCAAGGGTGTCATTTTCCAAACTAAGAGTGTTGAATATAACAAAGCATCATGGTATTTTGGTTATGATTTCCTCAAACATGGTTCAAATATTACATAATCTAGAACGACTAGAGGTGACAAAGTGTGATTCAGTGAATGAGGTTATCCAAGTGGAAAGTGGCAAATGA 3012 0.4207 MVEIVISVAAKVAEYLVDSIIRPLGYLVNYHRNITDLNQRIDSLHLARERLQVPVDEANRQGDEIFPGVQEWQTYAEGIIQKRNDFNEDERKASKSCFYLKSRYQLSKQAEKQAAEIVDKIQEAHNFGDRVSYRPPPPPPPFISSASFKDYGAFQSRESTFNQIMEALRNEDMRMIGVWGMGGVGKTTLVKQVAQQAEEDKLFHKVVMVLHISQTPNIAEIQEKIARMLGLKFEVKEDRAGRLRQRLKREEKILVILDDIWGKLELGEIGIPYRDDHKGCKVLLTSREHQVLSKDMRTQKEFHLQHLSEDEAWNLFKKTAGDSVERPELRPIAVDVAKKCDGLPVAIVTIANALRGESVHVWENALEELRRSAPTNIRGVSKDVYSCLELSYNHLESDEVKSLFLLCGVLGLGDIYMDFLLLYAMGLNLFKGFFSWEKAANKLITLVENLKGSSLLLDDEDRGNERFSSLFFNDAFVRMHDVVRDVAISIASKDPHQFVVKEAVGLQEEWQWMNECRNCTRISLKCKNIDELPQGLVCPKLKFFLLYSGDSYLKIPDTFFQDTKELTVLDLSGVSLKPSPSSLGFLLNLRTLCLNRCVLEDIAVIGHLERLQVLSLACSHIYQLPKEMMKLSDLRVLDLRYCFSLKVIPQNLIFSLSRLEYLSMKGSVNIEWEAEGFNSGERINACLSELKHLSGLRTLELEVSNPSLLPEDDVLFDNLTLTRYSIVIGDSWRPYDEEKAIARLPNDYEYKASRRLRLDGVKSLHVVNRFSKLLKRSQVVQLWRLNDTKHVVYELDEDGFPQVKYLCIWSCPTMQYILHSTSVEWVPPRNTFCMLEELFLTSLSNLEAVCHGPILMGSFGNLRIVRVSHCERLKYVFSLPTQHGRESAFPQLQSLSLRVLPKLISFYTTRSSGIPESATFFNQQEAFPNLEELRLTLKGTVEIWRGQFSRVSFSKLRVLNITKHHGILVMISSNMVQILHNLERLEVTKCDSVNEVIQVESGK* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0847 1003 SUPERFAMILY L domain-like 478 988 - -
Vvi10g0847 1003 Gene3D - 144 305 IPR027417 -
Vvi10g0847 1003 FunFam Probable disease resistance protein At1g61300 151 301 - -
Vvi10g0847 1003 Gene3D Ribonuclease Inhibitor 472 726 IPR032675 -
Vvi10g0847 1003 Gene3D Ribonuclease Inhibitor 756 1000 IPR032675 -
Vvi10g0847 1003 PRINTS Disease resistance protein signature 175 190 - -
Vvi10g0847 1003 PRINTS Disease resistance protein signature 629 645 - -
Vvi10g0847 1003 PRINTS Disease resistance protein signature 247 261 - -
Vvi10g0847 1003 PRINTS Disease resistance protein signature 340 354 - -
Vvi10g0847 1003 Gene3D - 306 395 IPR042197 -
Vvi10g0847 1003 SMART AAA_5 172 308 IPR003593 GO:0016887
Vvi10g0847 1003 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 934 - -
Vvi10g0847 1003 Pfam NB-ARC domain 158 393 IPR002182 GO:0043531
Vvi10g0847 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 407 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0847 Vvi-Chr10 13230072 13236110 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0847 172 497 WRKY Transcription Factor Family AT5G45050 25.740 4.17e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0847 - - vvi:100855173 1427.54