Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0808 ATGTTATATATATATATATTAATAAACTTAATGTTATATACTGGAAAGAGGAGTAACATATCCAGAATTGTCCTCATCACTACGGAGGTTCCTACAGTTATAGTCTTGCTTATCATTCTCATATGGTTCTTTGTGAGGAGGGCTCGCAAAGAGAAAGTTGAAAATGATGAAATTATAAGTGCGGAATCCTCACAATTCAACTTCAGTTCTATTACAGTTGCAACAAACAATTTTTCAAATGGTAATAAGCTTGGAAGGGAGGGATTCGGTGATGTTTACAAGGGAGTACTTTCAAATGGACAAGAAATAGCGGTGAAGAGGCTATCAAAGAAAACTTATCAAGGTGAACCAGAATTTAAAAATGAAGTTCTACTGTTGGCCAAACTTCAACACAGGAATTTGATTAGACTCCTAGGTTTTTGCCTAAAAGGAGAGGAGAGACTTCTCATTTATAAGTAG 459 0.3508 MLYIYILINLMLYTGKRSNISRIVLITTEVPTVIVLLIILIWFFVRRARKEKVENDEIISAESSQFNFSSITVATNNFSNGNKLGREGFGDVYKGVLSNGQEIAVKRLSKKTYQGEPEFKNEVLLLAKLQHRNLIRLLGFCLKGEERLLIYK* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0808 152 ProSiteProfiles Protein kinase domain profile. 78 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0808 152 SUPERFAMILY Protein kinase-like (PK-like) 58 151 IPR011009 -
Vvi10g0808 152 FunFam Putative G-type lectin S-receptor-like serine/threonine-protein kinase 40 152 - -
Vvi10g0808 152 Gene3D Phosphorylase Kinase; domain 1 41 152 - -
Vvi10g0808 152 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 152 - -
Vvi10g0808 152 Pfam Protein tyrosine and serine/threonine kinase 80 151 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0808 Vvi-Chr10 12498263 12499398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0808 20 152 Receptor kinase-like Gene Family AT4G23190 54.676 6.30e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi10g0808 PK_Tyr_Ser-Thr 2.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0808 - - vvi:100247260 202.601