Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0789 ATGAGCTTTCAAATCTCATTACAAACGCTCACTTCTTGTTCAAGATTGCCCATCAATCTTACTGACAAACTTTCCTCTTGTACATTTGCCATTATAGCAGGAGCTGCTTTTGGTGAAAAATGCAAAGATCAAGATGCCTTCATATTAGTCTTGAAGGAAACGTTAGAGCTATTGTTTGGTCTCTGTGTTACTAATATGTATCCTTCAGTTAAATGGCTTGACCTGATTAGTGGAATGAGATATAAAATTGAGAAGGTATTTCAAAGGACTGATAGGATACTCCAAAACATTGTTGATGAGCATAGAGATAAAATGCAAACAGAAGCAGGCAAGCTACAAGGGGAGGAAAATATAGTTGATGTTCTTTTAAAAATTCAACAACATGGTGATCATGAATTTCCCTTAACTGACAACAACATCAAAAGTAATCATACTGGTTAG 441 0.3537 MSFQISLQTLTSCSRLPINLTDKLSSCTFAIIAGAAFGEKCKDQDAFILVLKETLELLFGLCVTNMYPSVKWLDLISGMRYKIEKVFQRTDRILQNIVDEHRDKMQTEAGKLQGEENIVDVLLKIQQHGDHEFPLTDNNIKSNHTG* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0789 146 Gene3D Cytochrome P450 3 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0789 146 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 142 - -
Vvi10g0789 146 SUPERFAMILY Cytochrome P450 10 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0789 146 Pfam Cytochrome P450 17 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0789 Vvi-Chr10 12064277 12064717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0789 7 142 Cytochrome P450 AT3G48310 30.882 9.65e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0789 - - vvi:100254557 236.498