Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0787 ATGGAGTTCTCCTCCTCTTCTCTCCTCTTCGCTTTTCTTCTCTTTCTGTACATGCTGTACAAGATAGGGAAGAGATCCAAAGCCAACATCTCAACTCAAAAGCTGCCCCCAGGGCCATGGAAACTGCCTCTAATTGGAAACGTGCATCAGCTTGTTGGCTCACTTCCTCACCGCTCCCTAACTCTCTTGGCCAAGAAGTATGGGCCTCTCATGCGGCTACAACTAGGTGAAGTTTCCACACTGATTGTTTCATCACCAGAGATGGCCAAACAAGTTATGAAAACCCATGATACCAATTTTGCTCAAAGGCCCATTCTTCTTGCTACCAGGATTTTATCTTATGATTGTAGCGGCGTTGCTTTTGCTCCATATGGTGACTATTGGAGACAACTTCGTAAAATTTGTGTGGTTGAGCTTCTAACTGCTAAGCGTGTTAAATCCTTCCAATCGGTTAGGGAAGAGGAGATTTCAAATCTCATTACGATGGTCACATCTTGTTCAAGATTGCAAATCAATTTTACAGAGAAAATTTCCTCTTTGACATTTTCCATTATAGCAAGAGCTGCCTTTGGTAAAAAAAGCGAAGACCAAGATGCATTCTTATCAGTTATGAAGGAACTCGTGGAGACGGCTTCTGGTTTCTGTGTTGCTGATATGTATCCTTCTGTCAAATGGCTTGACCTGATCAGTGGAATGAGATACAAAATTGACAAGGTATTTCGGATGACTGATAGGATTCTCCAAAACATCGTTGATGAGCATAGAGAGAAATTGAAAACACAATCAGGCAAGCTAGAAGGGGAGGCAGATCTAGTTGATGTTCTTTTAAAACTTCAACAGAATGACGATCTTCAATTTCCCTTAACTGACAACAACATCAAAGCAGTCATACTGGACATTTTCGGTGGTGCAGGCGAGTCAACATCCACTTCTGTAGAGTGGGCAATGTCGGAAATGCTGAAAGCCCCAATAGTGATTGAGAAGGCACAGGCTGAAGTAAGGTCGGTGTTTGATGGAAAAGGGCATGTGGATGAAACTGCCATTGATGAATTAAAATTCCTAAAAGCAGTAGTGAACGAAACCTTGAGGCTACACCCTCCTTTTCCTCTACTACTTCCAAGGGAATGTAGGGAGATGTGTAAGATTAATGGATATGAGATACCCGAGAAGACTAGAATCATTGTTAATGCATGGGCAATTGGCCGAGATTCTGATTATTGGGTTGAAGCTGAGAGATTTTACCCAGAGAGATTCCTGGATAGTTCAATCGATTACAAGGGTACTGATTTTGGATATATTCCATTTGGTGCTGGAAGAAGGATATGTCCAGGCATACTGTTTGCTATGCCTGGTATTGAGCTGCCACTGGCAAATTTGCTGTACCATTTTGACTGGAAACTCCCGAATGGAATGAAGGCAGAGGATCTAGACATGACAGAAGCATTCGGCCTAGCAGTTCGCAGAAAACAAGATCTGCACTTAATTCCCATTCCTTATAATCCATCGCATGCTGATTGA 1518 0.4249 MEFSSSSLLFAFLLFLYMLYKIGKRSKANISTQKLPPGPWKLPLIGNVHQLVGSLPHRSLTLLAKKYGPLMRLQLGEVSTLIVSSPEMAKQVMKTHDTNFAQRPILLATRILSYDCSGVAFAPYGDYWRQLRKICVVELLTAKRVKSFQSVREEEISNLITMVTSCSRLQINFTEKISSLTFSIIARAAFGKKSEDQDAFLSVMKELVETASGFCVADMYPSVKWLDLISGMRYKIDKVFRMTDRILQNIVDEHREKLKTQSGKLEGEADLVDVLLKLQQNDDLQFPLTDNNIKAVILDIFGGAGESTSTSVEWAMSEMLKAPIVIEKAQAEVRSVFDGKGHVDETAIDELKFLKAVVNETLRLHPPFPLLLPRECREMCKINGYEIPEKTRIIVNAWAIGRDSDYWVEAERFYPERFLDSSIDYKGTDFGYIPFGAGRRICPGILFAMPGIELPLANLLYHFDWKLPNGMKAEDLDMTEAFGLAVRRKQDLHLIPIPYNPSHAD* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0787 505 CDD CYP71-like 66 492 - -
Vvi10g0787 505 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PANTHER OS08G0105600 PROTEIN 61 501 - -
Vvi10g0787 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vvi10g0787 505 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 FunFam Cytochrome P450 71D8 28 496 - -
Vvi10g0787 505 Gene3D Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 Pfam Cytochrome P450 36 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0787 505 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0787 Vvi-Chr10 12043101 12044839 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0787 33 499 Cytochrome P450 AT3G26330 42.857 1.55e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0787 - - vvi:100246036 986.867