Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0786 ATGGCAGCTGAAGCATTGAACTCAATATTCCAACAATGGGACACACAGTCGGCGGCATTGTGGAACATCAGTGGGGAGCCATGCACCGGGTCAGCCATAAGTGGGAGTGGATTTGAGGAGACAGCTAACAACCCAGCTATCACTTGTGACTGTACTTACAATAATTCTACCACCTGCCACATTACTCAGCTGAGAGTGTATGCTTTGAACAGAAGAGGAGTCATTCCAGAGGAACTCACAGCTCTGACTTATCTCACCTTTTTGAAGATTGATCAAAATTACTTCACAGGTCCTTTGCCTTCATTTATTGGAAATTTATCCAAATTGCAATTATTGTCACTTGCTCACAATGCACTCTCTGGGACCATTCCAATGGAACTTGGAAATCTCCAGGAACTAACAGTGTTGTCCTTAAGTTCAAATAATTTTTCTGGTACTCTTCCTCCAGAACTTGGAAATCTGGTTAACCTTCGGGAACTTTATATTAACAGCCTTGGCGTAGGTGGTGAGATTCCCTCAACATTTGCTAACCTTGAGAACATGCAAGTCATGCGGGCATCAGACTGTCCATTCAGTGGAAAGATACCAGACTTCATTGGGAACTGGACCAAGCTTACATCTTTGAGGTTTCAAGGTAACTCTTTTGAAGGTCCAATACCTTCCAGTTTTTCTAAATTGACCTCATTGAGCTCTCTGCGAATAAGTGATTTATTCAATGTGAGCTCATCTCTTGATTTCATTAAGGATTTGAAGAACTTAACCGACTTAGTTCTGAGGAATGCATTAATCACTGGAAGTATTCCCTCTTACATAGGAGAATTCCAAAGTTTGCAAAGATTGGATTTAAGTTTCAACAACTTAACCGGTGGAATCCCCAGTTCGTTGTTCAACTTGGGTTCTCTCGCTAACTTGTTTCTCGGAAACAATAGCCTGTCTGGAACTCTTCCAACCCAAAAAAGTAAACAACTCCAAAATATAGATTTGTCTTACAATGAACTTTCAGGAAGTTTTCCTTCATGGGTAACCTCAGGTTTACAATTGAATTTAGTGGCCAACAACTTCACATTTGATAGCTCAAACAGAAGTCTTTTGCCAGGATTGAATTGTCTACAGAGAAACTTCCCATGCAATAAGAATACTCCACGCTATGCCAACTTCTCGATCAAGTGTGGTGGCTCAGAGATGAGAAATGCAGAAGGCATAGTGTATGAGGCTGAAAACTCAACTCTTGGAGCAGCATCTTATTATGTTACCAGTACAGAAAAATGGGCAGTGAGCAATGTGGGGTTGTTTTCTGACAGAAGCAATCCATCATATGTTGATAACAACTTGATGCAAGTTACCGGCACTAATACTCCAGAGCTTTTCCAGAGTTCAAGGATATCACCTGGATCACTTAGATACTATGGCCTGGGACTTGAAAATGGACCTTACATAGTAAGTTTGGAATTTGCGGAAACAGTATTTAAAGATCGAGATACACAAACTTGGGAGAGTCTAGGCAGGCGTGTTTTTGATATTTACATTCAGGGAGCCCTTCAATTCAAAGACTTTGACATATCAAAAGAGGCTGGTGGGGTTGAGAGAGCACTTGAGAAAAAATTCTATGCTACTGTATCAGAAAACTATCTCGAAATTCATCTGTTTTGGGCCGGTAAGGGAACCTGCTGCAATCCAATCCAGGGTTATTATGGACCATCCATTTCAGCTCTCAGTGTTGTTTCAGATTTTACACCAACTGTAGCTGGAAATCCACCAATTCCTCCCTCAAAGAAGAACAACACTGGGTTGATTGTGGGTGTTGCAGTTTCTGTTGGAGTTGTGAGCATGATACTGATATGTTCAGTTCTTTACATAAAAAGGAAAGCTTCATATGTCAATGAGGATGAAGAGTTTCTTGGAATAGGCCCTAGACCAAACACTTTCAGTTATTCAGAGTTACGAACTGCAACAGAAGACTTCAATCCTGCAAATAAGCTAGGGGAGGGTGGATTTGGGCCTGTGTACAAGGGCACCCTTAATGATGGGAGGGTAGTAGCTGTGAAGCAACTTTCAGTAGCATCTCAACAAGGGAAGAGTCAATTTGTGGCAGAGATTGCTGCCATATCTGCAGTGCAGCATCGAAACCTTGTGAAGTTGTATGGGTGCTGCATTGAAGGAAATAGACGGCTCCTTGTTTACGAACATCTTGAAAACAAGAGCTTAGATCAGGCTCTCTTTGGCAAAAATGATTTGCATCTTGATTGGTCAACCCGCTTCAATATATGCTTAGGAACAGCTAGAGGGTTGGCTTATCTTCATGAAGACTCAAGGCCAAGGATTGTACACAGGGATGTTAAGGCTAGTAACATTCTCCTTGATGCAGAGCTCTTCCCAAAAATATCAGATTTTGGACTGGCAAAGCTGTATGATGACAAGAAAACACACATCAGCACCCGAGTTGCAGGCACAATTGGATACCTAGCACCAGAGTATGCAATGCGAGGGCATCTGACAGAAAAAGCTGATGTCTTTGGATTCGGTGTTGTTGCTCTAGAGATCCTCAGTGGGAGGCCAAACTCTGATAACAGCTTGGATACTGAAAAGATATATCTTCTGGAATGGGCATGGAATCTACATGAAAATAACCGAAGCTTGGAGCTGGTGGATCCAACATTGACAGCATTTGATGATAGTGAAGCCAGTCGGATCATAGGAGTGGCTCTCTTGTGCACCCAGGCATCACCAATGCTGCGGCCAACAATGTCGCGTGTTGCAGCAATGCTTGCAGGAGACATTGAAGTAGGCATAGTTACAGCAAAACCCAGTTACTTAACAGATTGGGATTTCAAAGACATAACAAACAGCTTTTTGAAAGAAGATAGTCAGGCATCTGTAGCATCTAAGAGCCGGAAGCAGGATAATACAGCTGATCAAATGCCTTCCCCTGTTAGTCCCACTGAACCAATGCTCCATGAGATCATTGGAGAAGGAAGGTGA 2979 0.4236 MAAEALNSIFQQWDTQSAALWNISGEPCTGSAISGSGFEETANNPAITCDCTYNNSTTCHITQLRVYALNRRGVIPEELTALTYLTFLKIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMELGNLQELTVLSLSSNNFSGTLPPELGNLVNLRELYINSLGVGGEIPSTFANLENMQVMRASDCPFSGKIPDFIGNWTKLTSLRFQGNSFEGPIPSSFSKLTSLSSLRISDLFNVSSSLDFIKDLKNLTDLVLRNALITGSIPSYIGEFQSLQRLDLSFNNLTGGIPSSLFNLGSLANLFLGNNSLSGTLPTQKSKQLQNIDLSYNELSGSFPSWVTSGLQLNLVANNFTFDSSNRSLLPGLNCLQRNFPCNKNTPRYANFSIKCGGSEMRNAEGIVYEAENSTLGAASYYVTSTEKWAVSNVGLFSDRSNPSYVDNNLMQVTGTNTPELFQSSRISPGSLRYYGLGLENGPYIVSLEFAETVFKDRDTQTWESLGRRVFDIYIQGALQFKDFDISKEAGGVERALEKKFYATVSENYLEIHLFWAGKGTCCNPIQGYYGPSISALSVVSDFTPTVAGNPPIPPSKKNNTGLIVGVAVSVGVVSMILICSVLYIKRKASYVNEDEEFLGIGPRPNTFSYSELRTATEDFNPANKLGEGGFGPVYKGTLNDGRVVAVKQLSVASQQGKSQFVAEIAAISAVQHRNLVKLYGCCIEGNRRLLVYEHLENKSLDQALFGKNDLHLDWSTRFNICLGTARGLAYLHEDSRPRIVHRDVKASNILLDAELFPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEILSGRPNSDNSLDTEKIYLLEWAWNLHENNRSLELVDPTLTAFDDSEASRIIGVALLCTQASPMLRPTMSRVAAMLAGDIEVGIVTAKPSYLTDWDFKDITNSFLKEDSQASVASKSRKQDNTADQMPSPVSPTEPMLHEIIGEGR* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0786 992 FunFam Putative LRR receptor-like serine/threonine-protein kinase 730 934 - -
Vvi10g0786 992 CDD STKc_IRAK 660 922 - -
Vvi10g0786 992 Pfam Protein kinase domain 657 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0786 992 FunFam Leucine-rich repeat receptor-like protein kinase 383 575 - -
Vvi10g0786 992 SUPERFAMILY Protein kinase-like (PK-like) 636 922 IPR011009 -
Vvi10g0786 992 FunFam Leucine-rich repeat receptor-like protein kinase 624 729 - -
Vvi10g0786 992 ProSiteProfiles Protein kinase domain profile. 654 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0786 992 MobiDBLite consensus disorder prediction 954 992 - -
Vvi10g0786 992 Gene3D Phosphorylase Kinase; domain 1 626 729 - -
Vvi10g0786 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Vvi10g0786 992 MobiDBLite consensus disorder prediction 954 976 - -
Vvi10g0786 992 Pfam Malectin domain 386 571 IPR021720 -
Vvi10g0786 992 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 960 - -
Vvi10g0786 992 Gene3D Transferase(Phosphotransferase) domain 1 730 929 - -
Vvi10g0786 992 Gene3D - 384 577 - -
Vvi10g0786 992 Gene3D Ribonuclease Inhibitor 3 240 IPR032675 -
Vvi10g0786 992 SMART serkin_6 654 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0786 992 Gene3D Ribonuclease Inhibitor 241 350 IPR032675 -
Vvi10g0786 992 SUPERFAMILY L domain-like 57 340 - -
Vvi10g0786 992 FunFam Putative LRR receptor-like serine/threonine-protein kinase 240 362 - -
Vvi10g0786 992 FunFam Os05g0263100 protein 3 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0786 Vvi-Chr10 12006749 12021607 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0786 109 992 Receptor kinase-like Gene Family AT1G56120 58.691 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi10g0786 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0786 - - vvi:100261421 1959.5