Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0768 ATGCACAATGGAGCAAGTGATGGCTTATGGGGGAAGACAGAAACAAGGGAGAATGAGGCTGGGAGATATATACTTCTTGGACGGTTTTTAGAAGAGGAGGAAGGAAGCGCGAAAAGCAAAGAAAGAGATTTGAGACCACACGCGAGTAGGGATATTCCTGCTGGAAGAAGGGCTTTACCAGCCGTATGTGCATCACTGGTTGATGGTGCTGTAGGATGGCTTCTAGATGTTGTTAGAACTTGGGTCTTAGCATCTCTTGATGTTCTTATTGATATTACTGGTGGAAAGGTAAACATTCATGTACTAATGGCTCTTGCGGCCTCCGCATCAGTATTTATAGGAAACTCGTTGGAAGGTGGTTTACTTCTTGTGATGTTTAACCCGACTCATATTGCTGAAAAGTATTTCACCAGTCTCTCAGTGGTGGATGTTGAGGAGTTGAAGGAAAATTATCCAGAGTTCGCTCTTGTTTTGGAAGTGAATAATAATAAACCGCCTAACTTCTCTCATTTGGCATACAAAAAGGTCCCTTTAGTAGCTACTTCTCATTTGAAGAGATTCCAGACAAATGGCACTTATGTGGAAAAGATTGATAACCACGTGGAGTCCCTTTAG 615 0.4244 MHNGASDGLWGKTETRENEAGRYILLGRFLEEEEGSAKSKERDLRPHASRDIPAGRRALPAVCASLVDGAVGWLLDVVRTWVLASLDVLIDITGGKVNIHVLMALAASASVFIGNSLEGGLLLVMFNPTHIAEKYFTSLSVVDVEELKENYPEFALVLEVNNNKPPNFSHLAYKKVPLVATSHLKRFQTNGTYVEKIDNHVESL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0768 204 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 83 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0768 Vvi-Chr10 11702932 11704289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0768 82 178 Primary Pumps ATPases AT4G37270 69.072 1.21e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0768 K01534 - vvi:100255947 166.777