Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0749 ATGGAGGTCGTGGTATTGTCCCTCTCCGTTACTCTTCCGCTTCTCTTTCTTGGCCTTTTCATCTTTGCTTTTACCCGGAAATCGGGTGATGATGATAAGAAGTTGCCTCCCGGGAGCTTGGGATGGCCTATTATGGGGGAGACCCTAGAGTTTTTGTTTGGGAAGCCGGAAAATTTTGTGTTCGATAGGATGAAGAAGTACTCCCCTGACATCTTCAAGACCAAGATACTGGGGGAGAAGACTGTGGTGATTTGTGGGCCTGAGGGACACAAGTTTCTGTTTTCGAACGAGGCCAAGTACTTCACCGCATTTCGCCCCCATTCCATGCAGAAGATCTTCAGATCATACCAGGCTGCTGCTCCGAAGCAGATAGCCAGGGACGCTGAGGCTAAAATCATAAGGGCGCCAGGGTTTTTGAAGCCGGAAGCACTGATTCACTACCTGGGGAAAATGGACTCCATCACACAGCAGCAGCTGCAGGCTCACTGGGAGGGGAAGACGGAAGTGAAGGTCTTCCCTTTCGCCAAGACACTCACCTTGACTCTTGCTTGCCGCTTCTTCCTGGGCATCGACGATCCTGAAAGGATAGCCAGGCTTGTCACCAATTTCGATGATATTACCTTGGGGATGCACTCTATTCCTTTGAGGATCCCCGGGACAATTTTTTATCAAGCTAGCAAGGCTGCAGCTGCCATCCGCAAGGAGCTCTTCACCATCATCAAGGAGAAGAAAGCCGCCATGGCCACTGGACAGCCCATGCAAGATATTTTATCACATATGATTGTTGCTGCCGACCCAACCGGCAGATTCATGCCCGAGGCTGAGATTGCTGACAAAATCATGGGTTTATTAACTGCCGGATACAGCACTGTTGCCACCGCTATTGCTTTCCTCATTGTCGGAGAGAGACCTGATATCTACAACAAGATCTTGGCCGAGCAATGGGAGATCGCAGCCAGCAAGCAGCCTGGAGATTTCCTAAGCTGGGATGATATGCACAAGATGAAGTACTCATGGAATACAGTGTATGAAGTGATGAGATTCACACCCCCACTTCAGGGAACTTTCAGAACTGTTCTCGAGGGCTTTACCTATGCCGGTTACACCATTCCAAAAGGCTGGAAGGTATATTGGACAGTGAGCACCACAAACAAAAACCCGGCATACTTCCGGGACCCAGAAAAGTTCGATCCAACTAGGTATGAGGAACGGAATGGATCATCACCACCTCCTTTTGCGTTCGTGCCATTTGGAGGGGGGCAGAGAATGTGTCCAGGAAAAGAGTATGCGAGATTCGCAATTCTCACATTCCTTCACAACGTTGTGAAGAGATACAAGTGGGAAGTGCTCCTTCCTGATGAGAAGATCGTGGGTGATATGATGCCAACCCCACAAAAAGGACTTCCTATTCGCCTTCAACCACACTGA 1428 0.4944 MEVVVLSLSVTLPLLFLGLFIFAFTRKSGDDDKKLPPGSLGWPIMGETLEFLFGKPENFVFDRMKKYSPDIFKTKILGEKTVVICGPEGHKFLFSNEAKYFTAFRPHSMQKIFRSYQAAAPKQIARDAEAKIIRAPGFLKPEALIHYLGKMDSITQQQLQAHWEGKTEVKVFPFAKTLTLTLACRFFLGIDDPERIARLVTNFDDITLGMHSIPLRIPGTIFYQASKAAAAIRKELFTIIKEKKAAMATGQPMQDILSHMIVAADPTGRFMPEAEIADKIMGLLTAGYSTVATAIAFLIVGERPDIYNKILAEQWEIAASKQPGDFLSWDDMHKMKYSWNTVYEVMRFTPPLQGTFRTVLEGFTYAGYTIPKGWKVYWTVSTTNKNPAYFRDPEKFDPTRYEERNGSSPPPFAFVPFGGGQRMCPGKEYARFAILTFLHNVVKRYKWEVLLPDEKIVGDMMPTPQKGLPIRLQPH* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0749 475 SUPERFAMILY Cytochrome P450 33 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 Gene3D Cytochrome P450 25 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 Pfam Cytochrome P450 36 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vvi10g0749 475 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PANTHER CYTOCHROME P450 26 33 460 - -
Vvi10g0749 475 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0749 475 CDD CYP90-like 63 474 - -
Vvi10g0749 475 FunFam Taxadiene 5-alpha hydroxylase 26 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0749 Vvi-Chr10 11138600 11140198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0749 34 376 Cytochrome P450 AT5G36110 40.113 5.36e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0749 K20667 - vvi:100242468 937.947